Gene Saro_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1272 
Symbol 
ID3917903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1311265 
End bp1312620 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content62% 
IMG OID640444008 
Productglutamate dehydrogenase 
Protein accessionYP_496550 
Protein GI87199293 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGTTT CCGATCATGT CGACCTGCCG ACGTTCATGG AGGGCGTGAA GAAGCGCAAT 
CCCTATCAGC CCGAATTCGT CCAGGCTGTG CAGGAGGTTG CCGAGGACAT CTTCGACTTC
ATCGAGGACA AGGAGGAATA CCACGCCCAG CAGATCCTGC GCCGCATCGC GGAGCCGGAC
CGGGTCGTGT CGTTCCGGGT GTGCTGGGAG GATGACAATG GCAACGTCCG TGTCCAGCGC
GGTTGGCGCG TGCAGAACAA CAATGCCATC GGCCCCTACA AGGGCGGCAT CCGCTTTCAT
CCCTCGGTCA ATGAGTCCGT CCTGAAGTTC CTCGCTTTCG AGCAGACCTT CAAGAACGCG
CTGACGGGCT TGCCCATGGG GGGTGGCAAG GGCGGTTCGA ACTTCAACCC CAAGGGCAAG
AGCGTGCGCG AGATCATGCG CTTCTGCCAG TCGTTCATGA CCGAGCTCTA TCGCCACATC
GGCGCCGACG TCGACGTTCC GGCGGGCGAT ATCGGTGTTG GCGGGCGCGA GATCGGCTAC
ATGTTCGGTC AGTACAAGCG CATCACCAAC CACTTCACCG GCGTGCTGAC GGGCAAGGGT
CTCGAATGGG GTGGCTCGCT TATCCGTACC GAGGCGACCG GTTACGGCGC GGTCTATTTC
CTCGCCAACA TGCTGGCGAC CAAGGGTGAG GACCTTCGTG GCAAGACGGC GGTGATCTCC
GGTTCGGGCA ACGTCGCGAC GCATGCCGCC GAGAAGATCG TCCAGTTGGG CGGAAAGGTT
CTGACGCTGT CCGATTCCGG CGGGTTCATC CATGACCCCG ACGGCATCGA CCAGGAGAAG
ATCGACTGGG TGAAGACCCA CAAGACTCAT CGTCGCGGGC GCATCGAGGA ATACGTCGAT
GCCTTTCCAG GAGCGTCGTT CCATGCAGGC AAGACGCCGT GGGGCGTGCC CTGCGATGTC
GCGCTGCCCT GCGCCACGCA GAACGAACTG CTGGGCGAGG ATGCGCGCAC GCTCATCGCC
AACGGCTGCA AGGGCGTGGC CGAAGGCGCC AACATGCCGA CCGACCTCGA AGGCGTGCAT
GTGTTCAAGG CTGCCAGGAT TCTCTACGCG CCGGGCAAGG CATCGAACGC GGGGGGCGTC
GCGGTTTCTG GCCTCGAGAT GAGCCAGAAC TCCGAACGTC GCTCGTGGAA GGAGCATGAA
CTGCAGCAGA TGTTGAAGGA CATCATGGCC GGCATCCACA AGTCCTGCCT GACGTACGGC
GACCAGGGCG GCGGCTATAT CGACTACGTG AAGGGCGCGA ACATCGCCGG CTTCAAGAAG
GTTGCCGATG CCATGCTGGC TTTCGGCGTG GTCTGA
 
Protein sequence
MAVSDHVDLP TFMEGVKKRN PYQPEFVQAV QEVAEDIFDF IEDKEEYHAQ QILRRIAEPD 
RVVSFRVCWE DDNGNVRVQR GWRVQNNNAI GPYKGGIRFH PSVNESVLKF LAFEQTFKNA
LTGLPMGGGK GGSNFNPKGK SVREIMRFCQ SFMTELYRHI GADVDVPAGD IGVGGREIGY
MFGQYKRITN HFTGVLTGKG LEWGGSLIRT EATGYGAVYF LANMLATKGE DLRGKTAVIS
GSGNVATHAA EKIVQLGGKV LTLSDSGGFI HDPDGIDQEK IDWVKTHKTH RRGRIEEYVD
AFPGASFHAG KTPWGVPCDV ALPCATQNEL LGEDARTLIA NGCKGVAEGA NMPTDLEGVH
VFKAARILYA PGKASNAGGV AVSGLEMSQN SERRSWKEHE LQQMLKDIMA GIHKSCLTYG
DQGGGYIDYV KGANIAGFKK VADAMLAFGV V