Gene Saro_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1130 
SymbolmraY 
ID3916426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1175335 
End bp1176399 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content66% 
IMG OID640443865 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_496409 
Protein GI87199152 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0067928 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTACC TGCTGGCGCA ATGGCTGCAC TTTGAGGGGT TCAGCAACCT CATCCGATAC 
CAGACGTTCC GCGCCGGCGC GACGCTGCTG ACCGCGCTGG TGATCGGCCT GATCATCGGG
CCCCGGTTCA TCAACATGCT CCGCGTCCGC CAGGGCAAGG GCCAGCCGAT CCGCGAGGAC
GGCCCGCAGT CGCACCTCGC CAAGCGTGGC ACGCCGACCA TGGGCGGCCT GATGATCGTC
ACGGCGCTCA CGCTGTCGCT GCTCCTGTGG ATGGACGTCA CCAGCAGGCT CGTCTGGGCC
TGCGCCGTCG TCACGCTCGG CTTTGGGCTG ATCGGCTTCC TCGACGACTA CGACAAGGTG
ACGAAGTACG CGCACAAGGG CGTGCCCGCC AAGGTGCGGC TGGCCGGGGA ATTCGTCGTT
GCAGCCTTTG CCGCGTGGCT CGCGGTGGGC GAGACGAACC TCTACGTGCC GGTGTTCAGC
AACCTCTACG TCCCGCTCGG GCCGTTCTAC TATCTCTTCG CGATCTTCGT GATCGTGGGT
GCCGGCAATG CCGTGAACCT TACCGACGGC CTCGACGGGC TTGCCATCAT GCCCGTCATC
ATCGCGGCCG GCACCTTTGC GATCATTGCC TATCTCGCGG GCCGCTATGA CTTCGCGACG
TATCTCGGCA TCCCGCATGT GAAGGGCGCG GGCGAACTTG CGATCTTCTG CGCGGCGATG
ATGGGGGCGG GGCTGGCCTT CCTCTGGTTC AACGCGCCAC CGGCGGCGGT GTTCATGGGC
GATACCGGCA GTCTTGCGCT GGGCGGCGCG TTGGGCGTGA TCGCGGTCGC CGCGCACCAC
GAGATCGTGC TGGCCATTGT CGGCGGGCTG TTCGTGATGG AGGCGGTCTC GGTGATCGTC
CAGGTCGCGG TCTACAAGCG CACTGGCAAG CGGGTGTTCC GCATGGCGCC GATCCACCAC
CACTTCGAGC AGCTCGGCTG GAAGGAATCG ACCGTCGTCA TCCGCTTCTG GATCGTGTCG
ATCGTGCTCG CGCTGATCGG CCTTGCGACG CTGAAGGTTC GATGA
 
Protein sequence
MLYLLAQWLH FEGFSNLIRY QTFRAGATLL TALVIGLIIG PRFINMLRVR QGKGQPIRED 
GPQSHLAKRG TPTMGGLMIV TALTLSLLLW MDVTSRLVWA CAVVTLGFGL IGFLDDYDKV
TKYAHKGVPA KVRLAGEFVV AAFAAWLAVG ETNLYVPVFS NLYVPLGPFY YLFAIFVIVG
AGNAVNLTDG LDGLAIMPVI IAAGTFAIIA YLAGRYDFAT YLGIPHVKGA GELAIFCAAM
MGAGLAFLWF NAPPAAVFMG DTGSLALGGA LGVIAVAAHH EIVLAIVGGL FVMEAVSVIV
QVAVYKRTGK RVFRMAPIHH HFEQLGWKES TVVIRFWIVS IVLALIGLAT LKVR