Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1117 |
Symbol | |
ID | 3916413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1163430 |
End bp | 1164230 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640443852 |
Product | short chain dehydrogenase |
Protein accession | YP_496396 |
Protein GI | 87199139 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGA CGATCTTCAT CACCGGCGGC GCATCGGGCA TCGGCCGGGC GGTGGCGCAG CGATTCGGGC AGGGCGGATG GTTCGTCGGC ATCGCCGACA TCGATGAGGG CGGCATGATG CAGACCGCCG CGATGCTGCC GTCGGGCCGC TCGTCTCGCC ACAAACTCGA CGTGCGCGAC CGTTCGGCAT GGGACGCCGC GCTGGCCGAT TGTGCCCGGG CCGGGGGTGG ACGGATCGAT GTCGTGTTCA ACAACGCAGG GATTCCGATA GGCGGCGCTA TCGCAGACCT TGCGGTCGAG GAGATCGAGC GGACGCTCGA CATCAACCTC AAGGGCGTGA TCTTCGGCGC GCAGGCGGCC TATCCCTGGC TAAGGGCGAG CGCACCCGGA TCGGTTCTGC TCAACACCGC GAGTGCCGCG GGCATCTATG GCTCGCCCGG CGCATCGGTC TATTCGGCCA CGAAGTTCGG GGTACGTGCG ATCACCGAAT CGCTGGATGG GGAATGGGCG GAAGACGGCA TCCGCGTGCG CGACCTCATG CCAGGCTTCA TCGAGACGCC GCTGCTCGAT CATGCGCCCA ACCGCGCCTC GAACGAGGAC ATCCGCTCGC GCGTTCGCGG CGCGGGGCTC GAGATCACGC CGGTCAGCGA AGTGGCCGAA GCAGCGTGGG CCGCAGTGCA TGGCGAGCGG TTGCACACGC TGGTCGGCAA GACTGCGCGG CGGCTTGCAT TCGCCTCCCG GTGGATGCCC GGCGCGCTCC GCAAACAGAT GCGTTCGGCC GAGCGTCCCT TGGGCAAATA G
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Protein sequence | MGKTIFITGG ASGIGRAVAQ RFGQGGWFVG IADIDEGGMM QTAAMLPSGR SSRHKLDVRD RSAWDAALAD CARAGGGRID VVFNNAGIPI GGAIADLAVE EIERTLDINL KGVIFGAQAA YPWLRASAPG SVLLNTASAA GIYGSPGASV YSATKFGVRA ITESLDGEWA EDGIRVRDLM PGFIETPLLD HAPNRASNED IRSRVRGAGL EITPVSEVAE AAWAAVHGER LHTLVGKTAR RLAFASRWMP GALRKQMRSA ERPLGK
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