Gene Saro_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1117 
Symbol 
ID3916413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1163430 
End bp1164230 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID640443852 
Productshort chain dehydrogenase 
Protein accessionYP_496396 
Protein GI87199139 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGA CGATCTTCAT CACCGGCGGC GCATCGGGCA TCGGCCGGGC GGTGGCGCAG 
CGATTCGGGC AGGGCGGATG GTTCGTCGGC ATCGCCGACA TCGATGAGGG CGGCATGATG
CAGACCGCCG CGATGCTGCC GTCGGGCCGC TCGTCTCGCC ACAAACTCGA CGTGCGCGAC
CGTTCGGCAT GGGACGCCGC GCTGGCCGAT TGTGCCCGGG CCGGGGGTGG ACGGATCGAT
GTCGTGTTCA ACAACGCAGG GATTCCGATA GGCGGCGCTA TCGCAGACCT TGCGGTCGAG
GAGATCGAGC GGACGCTCGA CATCAACCTC AAGGGCGTGA TCTTCGGCGC GCAGGCGGCC
TATCCCTGGC TAAGGGCGAG CGCACCCGGA TCGGTTCTGC TCAACACCGC GAGTGCCGCG
GGCATCTATG GCTCGCCCGG CGCATCGGTC TATTCGGCCA CGAAGTTCGG GGTACGTGCG
ATCACCGAAT CGCTGGATGG GGAATGGGCG GAAGACGGCA TCCGCGTGCG CGACCTCATG
CCAGGCTTCA TCGAGACGCC GCTGCTCGAT CATGCGCCCA ACCGCGCCTC GAACGAGGAC
ATCCGCTCGC GCGTTCGCGG CGCGGGGCTC GAGATCACGC CGGTCAGCGA AGTGGCCGAA
GCAGCGTGGG CCGCAGTGCA TGGCGAGCGG TTGCACACGC TGGTCGGCAA GACTGCGCGG
CGGCTTGCAT TCGCCTCCCG GTGGATGCCC GGCGCGCTCC GCAAACAGAT GCGTTCGGCC
GAGCGTCCCT TGGGCAAATA G
 
Protein sequence
MGKTIFITGG ASGIGRAVAQ RFGQGGWFVG IADIDEGGMM QTAAMLPSGR SSRHKLDVRD 
RSAWDAALAD CARAGGGRID VVFNNAGIPI GGAIADLAVE EIERTLDINL KGVIFGAQAA
YPWLRASAPG SVLLNTASAA GIYGSPGASV YSATKFGVRA ITESLDGEWA EDGIRVRDLM
PGFIETPLLD HAPNRASNED IRSRVRGAGL EITPVSEVAE AAWAAVHGER LHTLVGKTAR
RLAFASRWMP GALRKQMRSA ERPLGK