Gene Saro_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1093 
Symbol 
ID3916389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1136291 
End bp1136938 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID640443828 
Productcondensin subunit ScpB 
Protein accessionYP_496372 
Protein GI87199115 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAGC CGAACGATCT TGAACGGGCG GTTGAAGCGA CATTGTTCGC CGCCGAGCAA 
CCCCTTACGG AACAAGAGAT TTCTGCGCAT CTGGGCGGCG TCGACCTGAA ACGCACCTTA 
CAGCACCTGA GCGACCTCTA CGCCGACCGT GGCGTACATC TGGTCGAGCG GGGAGGGCGC 
TGGCACTTCC AGACCGCACC CGACCTCGCC CACCTCCTGC GCCGTGAGAA GGAAGAGCCG 
CGCCGCCTGT CGCGCGCCGC TACCGAAGCG CTCGCCATCA TCGCCTACCA CGAGCCCGTC 
AGCCGTGCCG AGATAGAAGC GATTCGCGGC GTCCAGACCG CCAAGGGCAC GCTGGACGTG 
CTGCTGGAAG CGGGCTGGAT CCGCATCGCC GGTCGCCGCG AGGTGCCGGG GCGGCCGACG 
ATCTATGCGA CGACACCCGA TTTCCTCAGC CACTTCGGCC TCGAATCGCG TCGTGACCTG 
CCTGGAATCG AGGAATTGCG GGCCGCAGGC TTGCTCGACC CGGTCGACGA GGCGTTTGCA 
GTCTTGACGG GCGGGCACGA TGAGGACACG GGGGCGATCG AGTCCTCGGG CGGGGAGGAC 
GATGACGCGG ACGAGCGCGA TGGCGTCGCA AACGACGACA TCGCTTAG
 
Protein sequence
MSEPNDLERA VEATLFAAEQ PLTEQEISAH LGGVDLKRTL QHLSDLYADR GVHLVERGGR 
WHFQTAPDLA HLLRREKEEP RRLSRAATEA LAIIAYHEPV SRAEIEAIRG VQTAKGTLDV 
LLEAGWIRIA GRREVPGRPT IYATTPDFLS HFGLESRRDL PGIEELRAAG LLDPVDEAFA 
VLTGGHDEDT GAIESSGGED DDADERDGVA NDDIA