Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1041 |
Symbol | |
ID | 3915823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1080291 |
End bp | 1081076 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640443775 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_496320 |
Protein GI | 87199063 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.335933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGTC GCCGCCAGAT CTACGAAGGC AAGGCCAAGA TCCTTTACGA GGGCCCGGAA CCCGGCACCC TGATCCAGTA CTTCAAGGAC GATGCCACCG CGTTCAACGC GCAGAAGCGC GGCACGATCA ACGGCAAGGG CGTGATCAAC AACCGCATCA GCGAGTACGT GTTCACGCGC CTCGCCCATA TCGGCATTCC CACGCACTTC ATCCGCCGCC TCAACATGCG CGAGCAGCTG GTTCGCCAGG CGGAAATCAT TCCGATCGAA GTGGTCGTGC GCAACATCGC CGCCGGCTCC ATCTCCAAGC GCCTCGGCAT CGAAGAGGGT GAGCCGCTGC CGCACACCCT GATCGAATAC TACTACAAGG ACGATGCGCT GGGCGATCCG ATGATCGCGG AAGAGCACAT CGCCTGCTTC GGCTGGGCCA GCAACGAGGA AATGCAGGAC ATCTCCTCGA TGGCGATCCG CGTGAACGAT TTCCTCTGCG GCATGTTCGC GGCGATCAAC ATCAGCCTGG TCGATTTCAA GCTCGAATTC GGCCGCATCT GGGACGGCGA CTACAGCCGC GTGATCCTGG CCGACGAGAT CAGCCCCGAC GGCTGCCGCC TGTGGGACAT GACCACCGGC GAAAAGCTCG ACAAGGACCG CTTCCGCCGC GACCTCGGCG GCGAGGAAGA AGCCTACCAG GAAGTCGCCC GCCGCCTCGG CCTGCTCGAG AATGACGGCG GCCCGAGCGA AGTCTTCGAC CTCGGCGCCC ACCGCAAGCT GCGCGGCAAG AAATAA
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Protein sequence | MSRRRQIYEG KAKILYEGPE PGTLIQYFKD DATAFNAQKR GTINGKGVIN NRISEYVFTR LAHIGIPTHF IRRLNMREQL VRQAEIIPIE VVVRNIAAGS ISKRLGIEEG EPLPHTLIEY YYKDDALGDP MIAEEHIACF GWASNEEMQD ISSMAIRVND FLCGMFAAIN ISLVDFKLEF GRIWDGDYSR VILADEISPD GCRLWDMTTG EKLDKDRFRR DLGGEEEAYQ EVARRLGLLE NDGGPSEVFD LGAHRKLRGK K
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