Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1015 |
Symbol | |
ID | 3915797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1055129 |
End bp | 1055581 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640443749 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_496294 |
Protein GI | 87199037 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.228328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATGT CCGTCGGAGG CGGTGGAGGT GGCGGCCGTG GCAGGCGCGG CCGTGGTGGC CGTGCCGCGA TGAGCGAGAT CAACGTCACG CCGCTGGTCG ACGTCATGCT GGTGCTGCTG ATCATCTTCA TGGTCACCGC GCCGATGCTG GCGGCTGGCG TGCCGGTCGA CCTGCCCGAC AGCAAGGCCG ATCCGCTCGA CCAGCAGCAG GACCAGATCA CCGTCAGCAT CGATGCGCAG GGCAACGTCT TCCTCGACGA CCAGCAGCTT GCGCCGGGCG AACTGACCGA TCGCCTCGCC GGGCTCCAGC GCGGGCCCAA GCCGCCTCTT GTCACCCTGC GCGCGGATCG TGTGCTCGAC TGGGGCCGCG TCGCCGCCGT GATGGGCGAA CTGAACGCGG CGGGGTTCAA GTCGATCTCG CTGGTCACCA ACAGTTCATC CGCGCCGCAA TAG
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Protein sequence | MAMSVGGGGG GGRGRRGRGG RAAMSEINVT PLVDVMLVLL IIFMVTAPML AAGVPVDLPD SKADPLDQQQ DQITVSIDAQ GNVFLDDQQL APGELTDRLA GLQRGPKPPL VTLRADRVLD WGRVAAVMGE LNAAGFKSIS LVTNSSSAPQ
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