Gene Saro_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0848 
Symbol 
ID3915903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp898940 
End bp899983 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content66% 
IMG OID640443580 
ProductTrkA-N 
Protein accessionYP_496127 
Protein GI87198870 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0423628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTCG ACCTGCACAT GCTGAGGCAG GTGGGGCGCA AGCCGGTGAC AGTGCTGCGA 
CGCGCCCTGA AGGTGCCTGT CTGGGCGGAC CTCGGCATGA GGCTGGGCGC TGCTCTTGCA
CTGGTCATGC TGGTCGTCAT GGTCCACTGG TTCGACCGCG CAGGGTTGAA GGACAGCCAC
GACGGGACTG TAAGCTTCCT CGACGTCGTC TATTTCACGA TGATCTCGAT CACCACGACC
GGCTTTGGGG ACATCGCCCC GGTCAGCGAC CGTTCGCGGC TGATCGAAGC GGTGATCGTC
ACGCCGATTC GCGTGCTCGT GCTCTTCATA TTCGTAGGCA CGGCCTACAA CTTCATCATC
AAGCGCAGCT GGGAAAGGTG GCGCATGGCG CAGATCCAGA AGAACCTGAC CGACCACATC
GTGGTGCTGG GCTTCGGCAT TTCGGGCGCG GAAGCCGTGG CAGAACTGGT CGCGCGGGGC
ACCGATCCGG GCCGGATCGT GGTGATCGAC CCGGACGAGA CGCGCCTCGC CGTCGCGGCG
GAACTGGGCT GCAACGTCAT GGCCGCCGAC GCGACCCGCG ATGCGACGCT GATGGACGTG
CACATCGCCA GCGCCTGCGC CGTGCTGATC TCGGCAGGGC GCGATGACAC CTCGATCCTC
ATCACCCTGA CCGCCCGCCA TCTTGCACCC GGCGTGCCGA TAAGCACGGT CGTGCGCGCG
GTGGACAACG AGGCCCTTGC CCGGCAGGCC GGCGCATCGA CCGTCATCAA TCCCGTGCGC
TTCACCGGAC TGCTCCTGGC CGGATCGTCG CAGGGCACCC ACGTCGCCGA CTACCTCACC
GATCTCGCCT CGATCGAGGG CCGCGTGCAA CTGGTCGAAC GGACCGTGTC GCCGGAGGAA
GTAGGCAAAC CCCTGGCGAC CCTCGCCAGC GGAGGGCGGG GATTGCGCAT CCATCGCGGC
GACAGGATCG TCGGCTTCTG GGAAGACGCC GCGCAAGCTC TGGAGCCCGG CGACGTCATC
GTCGAGATCG TGCCTACGCG CTAG
 
Protein sequence
MRLDLHMLRQ VGRKPVTVLR RALKVPVWAD LGMRLGAALA LVMLVVMVHW FDRAGLKDSH 
DGTVSFLDVV YFTMISITTT GFGDIAPVSD RSRLIEAVIV TPIRVLVLFI FVGTAYNFII
KRSWERWRMA QIQKNLTDHI VVLGFGISGA EAVAELVARG TDPGRIVVID PDETRLAVAA
ELGCNVMAAD ATRDATLMDV HIASACAVLI SAGRDDTSIL ITLTARHLAP GVPISTVVRA
VDNEALARQA GASTVINPVR FTGLLLAGSS QGTHVADYLT DLASIEGRVQ LVERTVSPEE
VGKPLATLAS GGRGLRIHRG DRIVGFWEDA AQALEPGDVI VEIVPTR