Gene Saro_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0583 
Symbol 
ID3915595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp629263 
End bp630486 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID640443313 
ProductMltA 
Protein accessionYP_495864 
Protein GI87198607 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0658317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGGGG GACAATCGAC CGCCAGGTCC ACCACTTCGG TCGGGCTGCT GCTCGGCCTG 
ACGCTGCTGG GCGGCTGCGT GCGACTGGTC CCCGAATCGG GCGGGCCCCG CCCGGTGACG
CCGCCCTCGC CTCCGCAGGC GGCAAAGCCG GCCACCGCCG CGCTGACGGG CGTGACGCGT
GGCCCGATTG CCGCAGGGCT GGGGTTCAAG CCAGACAACA CAGCCGCCGC GCTGCGCTCG
TTCGTGCAGT CGTGCCCGCG CCTGACGAAG CGCACTGACA ATTCAGGGCT GACCGTCCCC
GCCGACTGGG CCCCGGCCTG TGCCGCGGCA CCGGGCTGGC CCGAAGGCGA GGCGGCGCGG
TTCTTCTCGA CCTATTTCGA AACCGCCGAG GTGGGCGACG GCAATGCCTT CGTCACCGGG
TACTTCGAAC CGGAGATCGC GGGCGTGCGC ACCCGCCAGC CCGGTTACGA CATTCCCGTC
TATGCTATGC CGCCCGATCT GGTGCGGGCA AGGCCGGGCG ATGCGCAACC GCTGCCCGAC
GGCAAGATGC CACTCGGTCG CTATGACGAC GCGGGCGTGT TCGTGCCCTA CTACGACCGC
GGCCAGATCG AGGACGGGGC ACTGGCCGAA AAGGGACTGG AGATTGCCTG GGCGGCAGAC
CCGGTCGAAC TGTTCTTCCT CCAGATCCAG GGCTCGGGCC GCCTGCGCGC GCCCGACGGC
AGCGTGATCC GCATCGGTTT TGCCGCGCAG AACGGCCATC CCTATTCCGG CATCGGCTCG
CTCATGCGCG AGCGCGGACT GATCGGCAGC CAGCCGGGGC AATATCCCGG TTCGATGCAG
GGCATCCAGC AGTACCTGCG CGACTATCCC GAAGCCGGCC GCGCGCTGAT GCGCCAGAAC
CGCAGCTATG TGTTCTTCCG CGAGCTGACC GGGCCCGGCC CCGTGGGCGC GCTCAACGTG
CCCATTTCGG GCCGCTCGAC GGTGGCGGTC GACCCCGCCT TCGTGCCGCT GGGCGCGCCG
GTCTGGCTCC AGCTTGACCG GACGGAGGCG AGCGGGCTGT GGGTGGCGCA GGACACCGGA
GGGGCGATCC AGGGCGCCAA CCGCTTCGAC AGCTTCTGGG GCGCCGGCGC GGAGGCACGG
CAGGTCGCGG GCGGCATGAG CGCGCGCGGC CGCGCGCTGC TCCTCCTGCC GAAGGGGACG
CTCGAGCGTC TGAACCAGCG CTGA
 
Protein sequence
MSGGQSTARS TTSVGLLLGL TLLGGCVRLV PESGGPRPVT PPSPPQAAKP ATAALTGVTR 
GPIAAGLGFK PDNTAAALRS FVQSCPRLTK RTDNSGLTVP ADWAPACAAA PGWPEGEAAR
FFSTYFETAE VGDGNAFVTG YFEPEIAGVR TRQPGYDIPV YAMPPDLVRA RPGDAQPLPD
GKMPLGRYDD AGVFVPYYDR GQIEDGALAE KGLEIAWAAD PVELFFLQIQ GSGRLRAPDG
SVIRIGFAAQ NGHPYSGIGS LMRERGLIGS QPGQYPGSMQ GIQQYLRDYP EAGRALMRQN
RSYVFFRELT GPGPVGALNV PISGRSTVAV DPAFVPLGAP VWLQLDRTEA SGLWVAQDTG
GAIQGANRFD SFWGAGAEAR QVAGGMSARG RALLLLPKGT LERLNQR