Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0570 |
Symbol | |
ID | 3918052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 616832 |
End bp | 617476 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640443300 |
Product | epoxide hydrolase domain-containing phosphatase |
Protein accession | YP_495851 |
Protein GI | 87198594 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.457347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTACG CAGCGGTGAT CTTCGACTTC GGCGGCGTGA TCACGTCCTC GCCCTTCGAG GCTTTCAACC GGCTCGAGGC CGAGCGCGGC CTTCCCCGCG ATCTCGTCCG GCGGATCAAT GCCCTGAACC CGGACACGAA CGCATGGGCC CTGTTCGAAC GAGCCGAGAT CGGCGCGGCG GAATTCGACC GGCTGTTCTC GGAAGAGGCG CGCGCGCTGG GGCACGAGCT GGACGGCGCT TCGGTGCTGG CGGTTCTCGC CGGCGCGGTG CGCCCGGCAA TGGTTTCCGC GCTCGACCGC CTGGCGGCCG AAGGCTACCG CCTGGGCTGC ATCACCAACA ACGTGCCCGC CGGACACGGC GCTGGCATGG CCCGGAGCGC CGACGCGCAC GACGAACTGG AACAGATCTT CGCCCGGTTC GAGCATGTGA TCGAAAGCAG CAAGGCCGGG GTCAGGAAGC CCGATCCGCG CATTTACCTG ATGATGTGCG ACGCGCTTGG CCTGGAGCCG CGCCAGTGCG TCTATCTCGA CGACCTTGGC ATCAACTGCA AGCCGGCCGC CGGTCTGGGG ATGCATGCGA TCAAGGTGAC CGGCGGGGAT CAGGCGCTGG CCGATCTTGG CGCAGTGCTC GGGCTGGCTT TCTGA
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Protein sequence | MTYAAVIFDF GGVITSSPFE AFNRLEAERG LPRDLVRRIN ALNPDTNAWA LFERAEIGAA EFDRLFSEEA RALGHELDGA SVLAVLAGAV RPAMVSALDR LAAEGYRLGC ITNNVPAGHG AGMARSADAH DELEQIFARF EHVIESSKAG VRKPDPRIYL MMCDALGLEP RQCVYLDDLG INCKPAAGLG MHAIKVTGGD QALADLGAVL GLAF
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