Gene Saro_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0539 
Symbol 
ID3918669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp588893 
End bp589378 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID640443269 
Product2-chlorobenzoate 1,2-dioxygenase 
Protein accessionYP_495820 
Protein GI87198563 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID[TIGR03232] benzoate 1,2-dioxygenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGC TCGATGAAGT CTGCGCCTTC CTCCACCGCG AGGCGCGCCT GCTCGATGAC 
CGGCAGTTGG ATGTCTGGCT GGAATGCTAT GCGCCCGATT GCACCTACTG GATGCCAGCC
TGGACCGACG ATGACGAGCT GGTCACCGAT CCGCAGAGCC AGATCTCATT GATCTACTAC
GCCAACCGGC AGGGGTTGGA GGACCGCGTC TACCGGCTCG AGACAGAGCG TTCCAGCGCC
AGCACGCCTG AGCCGCGCAC TGTCCACATG CTTGCGAATA TCGAACTGCT GGAAGATCGC
GGGGACGAAC TGGACGTGCG ATACAACTGG CACACGCTCA GCCATCGTTT CAAGGTGACC
AGCCAGTTCT TTGGCGTGAC CTTCTGCACG CTGCGACGGA GCATGGACGG CTTCAGCATT
GGCTCCAAGA AGGTCGTGCT GAAGAACGAC TACATCCACC AGGTGATCGA TGTCTATCAT
GTCTGA
 
Protein sequence
MSALDEVCAF LHREARLLDD RQLDVWLECY APDCTYWMPA WTDDDELVTD PQSQISLIYY 
ANRQGLEDRV YRLETERSSA STPEPRTVHM LANIELLEDR GDELDVRYNW HTLSHRFKVT
SQFFGVTFCT LRRSMDGFSI GSKKVVLKND YIHQVIDVYH V