Gene Saro_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0521 
Symbol 
ID3918651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp562789 
End bp563454 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID640443251 
ProductTetR family transcriptional regulator 
Protein accessionYP_495802 
Protein GI87198545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.769368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAGA AAGCAGCCCC GCGCTCACCT GCCCCGTTGA GTTCACACCT CAACCAGGGC 
CCCAAAGTCG CCCTTATCCT GGCGGCAGAA GTTCTTTTCG CGCGGGACGG CATAGAGGGG 
GCTTCGCTGC GCGAGATCGC GTCTCAAGCC GGACAGCGCA ACCACCACGC CGTCCAGTAT 
CACTTCGGTT CGCGCGATTC GCTTGTGCAG GCGGTATTCG ATTACCGCAT GAACCAGATG 
GAAGAGATGC GCGGCCTGAT GCTTTCGCAA GCCGAGGCCG AAGGCAAGCT GACCGACCTG 
CGCACGATCG TCGAAGTGAT CTTCCTCCCG CAGATCCAGC TGATCGATGC GTTTGGCGAT 
CATTCCTACG CCGCATTCCT GACAGCCTAT CTGCAGCGCT ACCAGGCGCA GCAATTCGGC 
CAGTTCGGCG ATCACGTTGC GCCGCAACTG GCTCGCACGC TGGCCCTGTT GCGGTCCTGC 
CTTGCCTATC TCAGTGAAGC GGCTGCACAG CGTCGCCTGA TCACGGCGTG CTTCATGTTC 
CTCAACATTC TGGTGATCCA CACCCGCGGC AACGGCAGCA ACGAGGAACG CTTCGAGGAT 
GCGGTCGAAG ACACCATCGG CCAGATCGTC GCCGCGTTTG CCGCGCCCGT CAAAGCGGTA 
GCGTAA
 
Protein sequence
MPQKAAPRSP APLSSHLNQG PKVALILAAE VLFARDGIEG ASLREIASQA GQRNHHAVQY 
HFGSRDSLVQ AVFDYRMNQM EEMRGLMLSQ AEAEGKLTDL RTIVEVIFLP QIQLIDAFGD 
HSYAAFLTAY LQRYQAQQFG QFGDHVAPQL ARTLALLRSC LAYLSEAAAQ RRLITACFMF 
LNILVIHTRG NGSNEERFED AVEDTIGQIV AAFAAPVKAV A