Gene Saro_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0516 
Symbol 
ID3918646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp557175 
End bp557762 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content62% 
IMG OID640443246 
ProductTetR family transcriptional regulator 
Protein accessionYP_495797 
Protein GI87198540 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG TAGAAAACGG CAAGACGCGC ATTCTTGACT CGGCTGCGAC GGCTCTTCGC 
CAGAAGGGCC TCGCCGGCGC GAAACTTACC GAGATTGCAG CGGGTGCCGG CATGCTTGCC 
CCCAGCATCT ACCACCATTT CTCCTCGAAG GATGATCTCG TCGAGGCCGT GATGATGGAG 
GGCATCTACC GCAACAACCG CCACATCATG GCCCAGGTCG AAGTCCTTGG GCCTTCTGCG 
ACCGCGTTGG AGCGATTAAA GGCGGCGATC GAGGCGCACA TCGGGTTTCT GCTGACAGGC 
GACGACTATT CATCCGCCGT CTCGCGCGTC TTCGATGACC TTCCCGCCGA GATGAAGGGG 
CGGGTTCTGG CGGCCTACTC CAGCTTCGAC AATTACTGGC GCGATCTCAT CGCCGCCGCC 
CAGGCCGATG GCTCGGCTCG AAGCGGTCTC GATCCGACTC TCGTCCGCAA GTTCCTGATC 
GCCATGCTTG ATTCATGCGC CACATGGTAC CGCCCCGGCA AGCTCAGCCC GGCGCAGATC 
GCCGAACAGG CCGCCAATCT TGCCCTGCAC GGTTTTGCGA AGGGCTAG
 
Protein sequence
MAQVENGKTR ILDSAATALR QKGLAGAKLT EIAAGAGMLA PSIYHHFSSK DDLVEAVMME 
GIYRNNRHIM AQVEVLGPSA TALERLKAAI EAHIGFLLTG DDYSSAVSRV FDDLPAEMKG 
RVLAAYSSFD NYWRDLIAAA QADGSARSGL DPTLVRKFLI AMLDSCATWY RPGKLSPAQI 
AEQAANLALH GFAKG