Gene Saro_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0260 
Symbol 
ID3917612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp274181 
End bp276076 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content58% 
IMG OID640442988 
Productprotein of unknown function DUF1524 RloF 
Protein accessionYP_495542 
Protein GI87198285 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCCGG AAAAGCTGAG CGTACAGGAA CTGTTTTCCC GTGAGCGCCG ATTCATCATC 
CCCCTTTTCC AGCGTGCCTA TGTTTGGAAT CAGGAGGAGC AGTGGGAACC GCTTTGGGAG
GATATCTCCC GCCGTGCCCA TGCGCATCTT CAGCGCTTGG GTCTGCCCGC CGAAGGTAAG
GTTCGCACGC ATTTCCTTGG GGCCGTCGTG CTCAATGTGG CCAACGTCAT GGGGCGCGGA
ATCTCTCGCT CAGACGTGAT CGACGGACAG CAGCGGTTGA CCACACTGCA GCTATTCCTA
GCCGCCCTGA GGGACATGAG CGGGGAGCTT GGTGCTGACG CCGATGATAT CCGCCTGTTC
AAGCGCCTCA CTCGCAACCC GGATTGCGAG GAAGGATCGG AGGAATTGTT CAAAGTCTGG
CCGACCAACT CTGACCGTGA GGTTTTCTCA CAGGTAATGT CGGCGGGCAG TCCTGCCGCC
TTGGAAGCGC GTTTCCCCGA AAACACCGGC GGCCGACCAC GCATGGTCCA AGCATACCTC
TTCTTCGCCA GGGCTATCGC TGAATTCATT CGTTCGGCCG AACATGCCAG TTCGGCGCCG
GATCGCTTTT TGTCGCTGGT CTCCGCGCTC AAGGAATCGC TGCAACTCAT CGTGATCGAA
TTGGAGGAAG GTGACGACCC ACAGGTTATC TTCGAAACGC TGAACGCACG CGGCCAGCCG
CTTCTCCCTT CCGACCTGAT CCGCAACTAC GTTTTCATGC GCATAGGCGA TGCGGAGGGC
AATCGTCTCT ACCAGACCTA CTGGTCGCAC TTTGACACCG AACAGGTCAT GGTGCCCGGG
AGCGACGGCG AGAGCAGGTT CTGGCACGTA GAAGAACGCC AAGGCCGCCT TGTGCGGCCG
CGCATCGACC TATTCATTTT CCATTACCTG ACAATGCATA CCGAGGACGA TATCCGCATC
GGACACCTGT TCAAGGAGTT CCGCGATTGG CGCGACGCGA ACAGCACGAG CAACGAGGAC
TTCCTCAAGG ACCTGAAGAC GGCGAGCCAT CATTTCGCCC GTCTGATCGC GCCCAAAGGC
AATTCCCGGC TGGAAGTCTT CGCTAGCAGG CTCCGTGCGC TCGACACCAG CACGGTTCAC
CCGCTTCTGC TCTTCCTGGC TTCGGTTGAA GGGCAAGGCA TTCCAGTGGC GGAAGTTGAC
CAGATCATCG TCGATCTCGA ATCCTACATG GTCCGCCGTT TCATCTGCTG GCAAACGCCG
AAAAACTATA ACCGCTTCTT CCTGTCCCTG CTGACAAAGG TAAAGCAGGC CTATGCGGCC
CGTGCCAAGG CTGACGATAC GGCGCTTGCC GATCTGCCCA CCGTGGCCGA AGTGGTCCGT
ACGGAACTGT TGCGCTCTCA GGAAGCCTCT GCCTTCTGGC CCAGCGACGA GCGCTTCCGG
GAGGGATGGC TTAACAATCC GGTTTACGTA TCCTCCCGCG CAGACCGCAG TGCAATGATT
CTACGCGCAC TTGGTGATGC GATGACGACT TCGAGGAACG AGCAACTCGA TCTCTCAGGT
CCGGTCACTG TCGAACACCT CCTTCCTCAG AAGGGCGCGA TCGAGGACTA TCCCTATCTC
GAAATCTCTT TGCCGCAAAA TCATGACGAG GCGAGCTGGC GCAAGGTGCT GGTCAACACA
GTCGGCAATC TCACTCTGCT GACCGGTGCC AACAACACCG CTGCGTCGAA CCATGCATTC
CCGGTCAAGC GAGCAAAGAT CGTTGAACAC AGCGATCTGC GCCTCAACGC CTGGTTGCGC
ACCGACACGC GCGACAGCTG GAACGAAACT GACATTCTCG CGCGCGGCGA AGAACTCTTC
CATTTTGCCC TTAAAATCTG GCCTCGCCCC GCATGA
 
Protein sequence
MKPEKLSVQE LFSRERRFII PLFQRAYVWN QEEQWEPLWE DISRRAHAHL QRLGLPAEGK 
VRTHFLGAVV LNVANVMGRG ISRSDVIDGQ QRLTTLQLFL AALRDMSGEL GADADDIRLF
KRLTRNPDCE EGSEELFKVW PTNSDREVFS QVMSAGSPAA LEARFPENTG GRPRMVQAYL
FFARAIAEFI RSAEHASSAP DRFLSLVSAL KESLQLIVIE LEEGDDPQVI FETLNARGQP
LLPSDLIRNY VFMRIGDAEG NRLYQTYWSH FDTEQVMVPG SDGESRFWHV EERQGRLVRP
RIDLFIFHYL TMHTEDDIRI GHLFKEFRDW RDANSTSNED FLKDLKTASH HFARLIAPKG
NSRLEVFASR LRALDTSTVH PLLLFLASVE GQGIPVAEVD QIIVDLESYM VRRFICWQTP
KNYNRFFLSL LTKVKQAYAA RAKADDTALA DLPTVAEVVR TELLRSQEAS AFWPSDERFR
EGWLNNPVYV SSRADRSAMI LRALGDAMTT SRNEQLDLSG PVTVEHLLPQ KGAIEDYPYL
EISLPQNHDE ASWRKVLVNT VGNLTLLTGA NNTAASNHAF PVKRAKIVEH SDLRLNAWLR
TDTRDSWNET DILARGEELF HFALKIWPRP A