Gene Saro_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0184 
Symbol 
ID3916172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp186971 
End bp189067 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content66% 
IMG OID640442910 
Productpeptidase S9, prolyl oligopeptidase active site region 
Protein accessionYP_495467 
Protein GI87198210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA ACTCGCTGAT CGCGGCGACG GCACTTGCCG TCGCGCTGGC CGCTCCCGCA 
CATGCCGAAC AGGCCGCTCC ACTCTCTCCC CAGGATCTCG TGACGCTGAG CCGCCTCGGC
GGCACCGCAA TCTCGCGCGA TGGCAACATG ATCGCCTATG TCGTCACCAC GACGGACCCG
GTCAGCTACA AGCGCACGCC TTCGCTGTGG GTCAAGCCCG CCGGCAAGGG CGAGCCGCGC
CGGATCGACA CCGCCGGAAG CGCCAGCGAT CCCGCCTTCG GGCCGGACGG CGCGCTCTAC
TACCTGTCGG ATCGCAAGGT CGGCGAAAGC GAGCGCACGC AGGTCTGGAA GGTCGATCCC
GCCACCGACG TCACGGCGCA GGTCACCGCC TTCGCCACCG ACGTCGCCGG CTTCGAGCTT
TCGCCCGATG GCAAGCGCAT TGCCGTCTGG GGCGACATTG CCCGCACCTG CCCGACCTTC
GGTTGCGAGA GCGACGGCAA CACCGCGCTG CCCGGCCCCG GAACAGGCCG TCACTACAAG
GACGGCGCGG GCTTCGTGCG CCACTGGGAT GCATGGGAGA CGCCGGGCAA CTACAGCCGC
GTGTTCGCAT TCGACATTGG CCCCGACGGC AAGGTGACGG GCGAGGGCAA GGCTGCCGAC
GGGCCGGTCG GAACGCTCAC CGGCGACAGC CCAGTCAAGC CCTTCGGCGG CGGCGAGGAC
GTGGCGTGGA GCGCGGATTC GCAATCGCTG TTCTTCGTCG CCCGCCAGGC CGATCGCAAC
GAGCCGACGT CGACCAATCT CGACATCTGG CACTCGAAGC TCGACGGCAC GGCTCCGACG
AACCTGACCG AGGCGAACAA GGCCACGGAC AACACGCCAG CCCCTTCGCC TGACGGCAAG
TGGCTCGCCT ATGCGGCGAT GGCGCGCCCC GGCTACGAGG CCGATCGTCT GGTGGTGAAC
CTCGTCAACC TCCAGACCGG AGAGCGCCGT GAGCTGACCG GTGCCTGGGA CCGCTCGGTA
GCCTCGCTTG CGTGGACGCC CGACGGCAAG GCGCTGATCG CGACGGCCGA GGACGTGCTC
GATACGCCCG CCTTCCGCAT CGATCCTGCC AGCGGCAAAG TCACCCGCCT CGTGCTCAAT
CCGGGCCGCG AAGGGCATGT CGGCAATGTC GTTCCGCTCA AGGACGGCCG CCTGCTCTAT
ACCCGCGACA CGATCGACGC TCCGGCCGAA CTTTACATCG GCAAGCCGGG CAAGGGCGGA
ACCCGCCTGA CCGACGTCGC AACGACCGCC CTTTCGCAAC GCGCGCCGGT GGTCACCCAG
CGCTTCAGCT TCAAGGGTGC CGACGGCGAT ACGGTCTGGG GGCAGATCAC CAAGCCGGGC
TGGGTCAAGG GCAGGATGCC CTCCGTCCTC TTCGTCCACG GCGGGCCGCA AGGCTCATAC
AACGATAGCT GGTCGAACCG CTGGAACCCG CGCGTGTGGG CAAGCCAGGG CTATGCGATC
GTCTCGATCG ATTTCCACGG GTCCACCGGC TACGGACAGG CCTTCACCGA CGCGATCAAC
CGCCAGTGGG GCGGCAAGCC GCTGGAAGAC CTGCAAAAGG GCTTCGCTGC CGCGATCGCC
CTCGATGGGC AGATCGATGG CGAAAATGCC TGTGCGGCAG GTGCATCGTA TGGCGGCTAC
ATGATGAACT GGATCGCCGG GAACTGGCCG GACCGCTTCA AGTGCCTCGT CCAGCACGAC
GGCGTGTTCG ATGCTCGCGC CATGGCCTAC GAGACCGAGG AACTGTGGTT CGACGAGTGG
GAGCACGGCG GGCACCCCTA TTACGAGGCG CCCGAAGAGT TCGAGAAGTG GAATCCGGTG
AACCACGTCG CCAAGTGGAA GACGCCGATG CTGGTCATCA CCAGCGAAAA GGATTTCCGC
ATTCCCTACA CGCAGGGTCT GGCCGCGTTC ACCGCCTTGC AGCGTCGCGG CATTCCTTCC
GAACTGCTGG TCTTCCCCGA CGAGAATCAC TGGGTCCTGA AGGCGAAGAA CTCGTTGCAG
TGGCACCAGA CCTCGTTCAA CTGGCTCGAA CGCTGGTTGA AGAAGGGTGA CAAGTGA
 
Protein sequence
MKTNSLIAAT ALAVALAAPA HAEQAAPLSP QDLVTLSRLG GTAISRDGNM IAYVVTTTDP 
VSYKRTPSLW VKPAGKGEPR RIDTAGSASD PAFGPDGALY YLSDRKVGES ERTQVWKVDP
ATDVTAQVTA FATDVAGFEL SPDGKRIAVW GDIARTCPTF GCESDGNTAL PGPGTGRHYK
DGAGFVRHWD AWETPGNYSR VFAFDIGPDG KVTGEGKAAD GPVGTLTGDS PVKPFGGGED
VAWSADSQSL FFVARQADRN EPTSTNLDIW HSKLDGTAPT NLTEANKATD NTPAPSPDGK
WLAYAAMARP GYEADRLVVN LVNLQTGERR ELTGAWDRSV ASLAWTPDGK ALIATAEDVL
DTPAFRIDPA SGKVTRLVLN PGREGHVGNV VPLKDGRLLY TRDTIDAPAE LYIGKPGKGG
TRLTDVATTA LSQRAPVVTQ RFSFKGADGD TVWGQITKPG WVKGRMPSVL FVHGGPQGSY
NDSWSNRWNP RVWASQGYAI VSIDFHGSTG YGQAFTDAIN RQWGGKPLED LQKGFAAAIA
LDGQIDGENA CAAGASYGGY MMNWIAGNWP DRFKCLVQHD GVFDARAMAY ETEELWFDEW
EHGGHPYYEA PEEFEKWNPV NHVAKWKTPM LVITSEKDFR IPYTQGLAAF TALQRRGIPS
ELLVFPDENH WVLKAKNSLQ WHQTSFNWLE RWLKKGDK