Gene Saro_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0107 
Symbol 
ID3915993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp111131 
End bp112870 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content67% 
IMG OID640442832 
ProductCBS 
Protein accessionYP_495390 
Protein GI87198133 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGAAGC GACTCCCCGC CCTGTTGCGC TGGCTGCGCA AGCAAGTCCG TGCAAGCGAA 
CTGGTGTTCC TCGCGCTCGC CATCGGAGTG GGCATGGCGG GTGGCCTGTT CACGGTAATC
CTGGGCGCCG CCGCGCGCAC CGTGCAACAC GTCCTATACG ACCTGCCTCC GGACCTCCGC
CTTAGCGCAG CTCCTTCGCT GCCACTATCC GTTCTCATCG TCCTGCCGCT TGGCGGCCTC
GTGCTCGCCG CGTTCAACTG GGCTGCGGGC GTCCGCCGGC GCGCGCTGGT CGACGCGGTC
GAGGCCAACG CTCTGCACGG GGGCCGCATG TCGGCCATGG ACAGCGCCGT GGTGGCTGGC
CAGACCGTCA TTTCCAACGG GTTCGGCGCG TCGGTCGGGC TTGAGGCGGC GTACGCACAA
GTCGGCGGTC TCTTCGGCTC GCTCGGTGCG CGCCTCCTCA GCCTGCGCCG ACCAGACGCG
CGAATCCTGG TGGGGGCGGG CGCCGGAAGC GCGATTGCAG CCGCATTCGG TGCGCCGCTT
GCCGGGGCAT TCTACGCCTT CGAGATCGTG ATCGGGGCCT ACACGCCGTC CGCCATCGCA
CCTGTAGTCG CCGCAGCGCT TGCCGGGGCT CAGGTCGCGC GTCGGCTTGG CGTCGTACCC
TATGTGGTCA GTGCCGAGCC AGGGCCGGCC ATCCACACGG CAGGCTACAT TGCCTACGGC
GGGCTGGGGG CAGTGTGTGC GCTGCTTGGC ATCGTGCTGA TGCGGGCGGT GGCGCTAGTG
GAAACAGGGT CGCGCAAGGC GATACCGGGG CCCTGGCGGC CTGCAATCGG CGGCCTGCTG
CTGATCCCAC TGGCCATGCT GACACCGCAG GCACTCTCGG CCGGACACAG CGCCCTCCAT
CTCGACATGA CCGAGACGCT ATCACTCGCC TTCGTGGCCA TGATCCTCCT GGTGAAGAGC
GCAAGTTCGA TCGTTTCGCT CGGCTTCGGT TTTCGCGGCG GCCTGTTCTT CGCCTCGCTG
TTTCTCGGCA CGCTGGTTGG ACACCTTTAC GCCGGTTTGC TGGCCCTGGG GCTGGGCCAC
CCGGTGCTCA ACATCGGCAA CGCATCACTG GTGGGAATGG CAGCCCTTGC AGTGGCGGTC
GTCGGCGCGC CCTTCACGAT GGCCATGCTC GTGCTCGAGG CGACGGGCAA CTTCAGCCTG
ACCGGAGCCG TACTTGCGGC ATCGCTCGTG TCCTCCACGC TGGTGCGCGA GCTGTTCGGC
TATTCCTTCT CCACATGGCG CCTGCACCTG CGCGGTGAAA CGATCACCAG CGCGCGCGAC
GTGGGCTGGG TAAGGACGCT AACCGCAGGA CGGATGATGC GGCGGGGGAT GGCGACGATA
GACGGCAGCG CGACCATCGC GGAACTGCGC CGCCGCTTTC CGCTTGGCTC CACAAGCCGC
GTAGTGGTGA CCGACACGTC CGGGAAATAC GCGGGGATCG TGACTATCGC CGCTGCCTTT
GCGGACGGCG TCAATTCCGA AGCGGCGGTC ACTTCGGTGT GCCACAGCGC GCAGGCCACG
CTTTCCCCGG AGCAAGACAT CGTCCAGATC ATGGGGCGCT TCGACGATCT GGCGACGGAC
GAACTGGCCG TGGTCGACAT GCAGGGCAAC GTCCTTGGCC TGGTCACCGA AGCCCACGTG
CGCAGGCGCT ATGCCGAAGA ACTGGACAAG GCGCAGCGAG ATCTGTTCGG AGAACGTTGA
 
Protein sequence
MLKRLPALLR WLRKQVRASE LVFLALAIGV GMAGGLFTVI LGAAARTVQH VLYDLPPDLR 
LSAAPSLPLS VLIVLPLGGL VLAAFNWAAG VRRRALVDAV EANALHGGRM SAMDSAVVAG
QTVISNGFGA SVGLEAAYAQ VGGLFGSLGA RLLSLRRPDA RILVGAGAGS AIAAAFGAPL
AGAFYAFEIV IGAYTPSAIA PVVAAALAGA QVARRLGVVP YVVSAEPGPA IHTAGYIAYG
GLGAVCALLG IVLMRAVALV ETGSRKAIPG PWRPAIGGLL LIPLAMLTPQ ALSAGHSALH
LDMTETLSLA FVAMILLVKS ASSIVSLGFG FRGGLFFASL FLGTLVGHLY AGLLALGLGH
PVLNIGNASL VGMAALAVAV VGAPFTMAML VLEATGNFSL TGAVLAASLV SSTLVRELFG
YSFSTWRLHL RGETITSARD VGWVRTLTAG RMMRRGMATI DGSATIAELR RRFPLGSTSR
VVVTDTSGKY AGIVTIAAAF ADGVNSEAAV TSVCHSAQAT LSPEQDIVQI MGRFDDLATD
ELAVVDMQGN VLGLVTEAHV RRRYAEELDK AQRDLFGER