Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0107 |
Symbol | |
ID | 3915993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 111131 |
End bp | 112870 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640442832 |
Product | CBS |
Protein accession | YP_495390 |
Protein GI | 87198133 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGAAGC GACTCCCCGC CCTGTTGCGC TGGCTGCGCA AGCAAGTCCG TGCAAGCGAA CTGGTGTTCC TCGCGCTCGC CATCGGAGTG GGCATGGCGG GTGGCCTGTT CACGGTAATC CTGGGCGCCG CCGCGCGCAC CGTGCAACAC GTCCTATACG ACCTGCCTCC GGACCTCCGC CTTAGCGCAG CTCCTTCGCT GCCACTATCC GTTCTCATCG TCCTGCCGCT TGGCGGCCTC GTGCTCGCCG CGTTCAACTG GGCTGCGGGC GTCCGCCGGC GCGCGCTGGT CGACGCGGTC GAGGCCAACG CTCTGCACGG GGGCCGCATG TCGGCCATGG ACAGCGCCGT GGTGGCTGGC CAGACCGTCA TTTCCAACGG GTTCGGCGCG TCGGTCGGGC TTGAGGCGGC GTACGCACAA GTCGGCGGTC TCTTCGGCTC GCTCGGTGCG CGCCTCCTCA GCCTGCGCCG ACCAGACGCG CGAATCCTGG TGGGGGCGGG CGCCGGAAGC GCGATTGCAG CCGCATTCGG TGCGCCGCTT GCCGGGGCAT TCTACGCCTT CGAGATCGTG ATCGGGGCCT ACACGCCGTC CGCCATCGCA CCTGTAGTCG CCGCAGCGCT TGCCGGGGCT CAGGTCGCGC GTCGGCTTGG CGTCGTACCC TATGTGGTCA GTGCCGAGCC AGGGCCGGCC ATCCACACGG CAGGCTACAT TGCCTACGGC GGGCTGGGGG CAGTGTGTGC GCTGCTTGGC ATCGTGCTGA TGCGGGCGGT GGCGCTAGTG GAAACAGGGT CGCGCAAGGC GATACCGGGG CCCTGGCGGC CTGCAATCGG CGGCCTGCTG CTGATCCCAC TGGCCATGCT GACACCGCAG GCACTCTCGG CCGGACACAG CGCCCTCCAT CTCGACATGA CCGAGACGCT ATCACTCGCC TTCGTGGCCA TGATCCTCCT GGTGAAGAGC GCAAGTTCGA TCGTTTCGCT CGGCTTCGGT TTTCGCGGCG GCCTGTTCTT CGCCTCGCTG TTTCTCGGCA CGCTGGTTGG ACACCTTTAC GCCGGTTTGC TGGCCCTGGG GCTGGGCCAC CCGGTGCTCA ACATCGGCAA CGCATCACTG GTGGGAATGG CAGCCCTTGC AGTGGCGGTC GTCGGCGCGC CCTTCACGAT GGCCATGCTC GTGCTCGAGG CGACGGGCAA CTTCAGCCTG ACCGGAGCCG TACTTGCGGC ATCGCTCGTG TCCTCCACGC TGGTGCGCGA GCTGTTCGGC TATTCCTTCT CCACATGGCG CCTGCACCTG CGCGGTGAAA CGATCACCAG CGCGCGCGAC GTGGGCTGGG TAAGGACGCT AACCGCAGGA CGGATGATGC GGCGGGGGAT GGCGACGATA GACGGCAGCG CGACCATCGC GGAACTGCGC CGCCGCTTTC CGCTTGGCTC CACAAGCCGC GTAGTGGTGA CCGACACGTC CGGGAAATAC GCGGGGATCG TGACTATCGC CGCTGCCTTT GCGGACGGCG TCAATTCCGA AGCGGCGGTC ACTTCGGTGT GCCACAGCGC GCAGGCCACG CTTTCCCCGG AGCAAGACAT CGTCCAGATC ATGGGGCGCT TCGACGATCT GGCGACGGAC GAACTGGCCG TGGTCGACAT GCAGGGCAAC GTCCTTGGCC TGGTCACCGA AGCCCACGTG CGCAGGCGCT ATGCCGAAGA ACTGGACAAG GCGCAGCGAG ATCTGTTCGG AGAACGTTGA
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Protein sequence | MLKRLPALLR WLRKQVRASE LVFLALAIGV GMAGGLFTVI LGAAARTVQH VLYDLPPDLR LSAAPSLPLS VLIVLPLGGL VLAAFNWAAG VRRRALVDAV EANALHGGRM SAMDSAVVAG QTVISNGFGA SVGLEAAYAQ VGGLFGSLGA RLLSLRRPDA RILVGAGAGS AIAAAFGAPL AGAFYAFEIV IGAYTPSAIA PVVAAALAGA QVARRLGVVP YVVSAEPGPA IHTAGYIAYG GLGAVCALLG IVLMRAVALV ETGSRKAIPG PWRPAIGGLL LIPLAMLTPQ ALSAGHSALH LDMTETLSLA FVAMILLVKS ASSIVSLGFG FRGGLFFASL FLGTLVGHLY AGLLALGLGH PVLNIGNASL VGMAALAVAV VGAPFTMAML VLEATGNFSL TGAVLAASLV SSTLVRELFG YSFSTWRLHL RGETITSARD VGWVRTLTAG RMMRRGMATI DGSATIAELR RRFPLGSTSR VVVTDTSGKY AGIVTIAAAF ADGVNSEAAV TSVCHSAQAT LSPEQDIVQI MGRFDDLATD ELAVVDMQGN VLGLVTEAHV RRRYAEELDK AQRDLFGER
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