Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0068 |
Symbol | |
ID | 3917667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 69911 |
End bp | 71506 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640442793 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_495351 |
Protein GI | 87198094 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCGCT TTGCCGCCCT GCTCGACGCG CTCGTGCTCA CCCCGTCGCG CAACGCGAAG CTTTTGCTGC TGGCCGACTA CCTGCGCGAG ACGCCCGATC CCGACCGTGG GTGGGCGCTT GCCGCGCTGA CCGACGGGCT GGACTTCCCG GCGGTGAAGG CAAGCACCAT CCGCGCGCTC ATGGCGGAGC GCATCGATCC GGTGCTGTGG ACGCTGAGCC GCGACTATGT CGGCGACACG GCCGAAACCG CCAGCCTGCT CTGGCCGGAA CCCATCGGCG ACCGCCTGCC CGCGCCCTCC GTCGCCGAAG TGGTAGACAC GCTCCATGCG GCCACGCGCG GCACCGCACC GGGCATCCTG GCCGAGCTTC TGGACCGCCT TGACGTCAAT GGTCGCTATG CTTTGCTGAA GCTTGCGACC GGCGCCATGC GCATCGGCAT CTCGGCGCGG CTTGCCAAGG TCGCCTTCGC CCAAGCCTTC GACGTGCGGG TCGATGACGT CGAGGAGTAC TGGCACGGGC AGGCGCCGCC CTATCTGCCC TTGTTCGACT GGGCGGCGAA CGGAGCGCCA CCGCCGCGAA CGGACCTGCT GCCGCTGTTC CGTCCGTTCA TGCTCGCCCA TCCGCTCGAA GCGGAACGCC TCGATCTTGC CGAATTCGCC GCCGAATGGA AATGGGACGG CATCCGGGTG CAGATCGTCC ATGTCGCAGG CGAGACGCGG GTCTATTCGC GCAGTGGCGA CGACATTTCG GCCACCTTCC CCGAAATCGC GGACGCGCTT GACCGGCCCT GCGTTCTCGA CGGCGAACTG CTGGTGCGCG GCGCGCATCA GGGCGGCGAG ACCGGCGGCG CGGCAAGCTT CAACGCGCTC CAGCAGCGTC TCGGCCGCAA GACCGTGTCG AAGGCCATGC TGCGCGACTA CCCGGCTTTC GTCCGGCTCT ACGATGTCCT TATCGAAGGG GCCGAGGACT TGCGCGAATG GGCCTGGGAG CAGCGCCGTG CCCGGCTCGA GACGCTGGCC CCGCAGCTCC ATCCCGAACG CTTCGATCTT TCGCAGGTGA TCCCGGCCGG AAGCTTCGAC GAACTTGCCG AGATCCGCGG TCGTTCGCGC GACGAGGCCA TCGAGGGCGT GATGCTGAAG CGGCGCGACA GCCCATATGT CGCCGGTCGC CGCACCGGCC TGTGGTACAA ATGGAAGCGC GATCCGCTGC TGATCGACTG CGTGCTGATG TATGCCCAGC GTGGAAGCGG GAAGCGATCC TCGTTCTATT CGGATTACAC CTTCGGCTGC TGGAACGGCG ATCCCGATGC GGGGGCCGAG CTCCTGCCGG TCGGCAAGGC CTATTTCGGC TTCACCGACG AGGAACTGAA GTGGCTCGAC CGCCATGTCC GCCAGCACAC CGTGGCAAAG TTCGGCCCGG TGCGTGAAAC CGACAAGTCG CTGGTGTTCG AAGTCGCCTT CGATAGCGTC CACGCCAGCA AGCGGCACAA GTCCGGCGTC GCCATGCGCT TCCCCCGCAT CAGCCGCATC CGGACGGACA AGCCCGCCCA CGAGGCCGAC CGGCTGGAGA CGCTGAAGGC CTTGATCGCC GACTAG
|
Protein sequence | MNRFAALLDA LVLTPSRNAK LLLLADYLRE TPDPDRGWAL AALTDGLDFP AVKASTIRAL MAERIDPVLW TLSRDYVGDT AETASLLWPE PIGDRLPAPS VAEVVDTLHA ATRGTAPGIL AELLDRLDVN GRYALLKLAT GAMRIGISAR LAKVAFAQAF DVRVDDVEEY WHGQAPPYLP LFDWAANGAP PPRTDLLPLF RPFMLAHPLE AERLDLAEFA AEWKWDGIRV QIVHVAGETR VYSRSGDDIS ATFPEIADAL DRPCVLDGEL LVRGAHQGGE TGGAASFNAL QQRLGRKTVS KAMLRDYPAF VRLYDVLIEG AEDLREWAWE QRRARLETLA PQLHPERFDL SQVIPAGSFD ELAEIRGRSR DEAIEGVMLK RRDSPYVAGR RTGLWYKWKR DPLLIDCVLM YAQRGSGKRS SFYSDYTFGC WNGDPDAGAE LLPVGKAYFG FTDEELKWLD RHVRQHTVAK FGPVRETDKS LVFEVAFDSV HASKRHKSGV AMRFPRISRI RTDKPAHEAD RLETLKALIA D
|
| |