| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0016 |
|---|
| Symbol | |
|---|
| ID | 3916058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 11772 |
|---|
| End bp | 12521 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640442741 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_495299 |
|---|
| Protein GI | 87198042 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCT ACACTCTGGC TGCTGCCGCC GGTGGCGCCG CGCCTCAGAA CAAGTTCGGT
TTCGCCGAAG CGCTGCAGCA GGGCGGTTTC ATCGCCTACG CCACCGTCGT GATCCTTGGC
ATCATGTCGT TCGGCTCGTT CTTCATTCTG TTCACGAAGT TCTTCGAGCA GAACAAGATC
CTCGGCCAGT ACAAGACCAT CCGCACCACC TTCTGGAAGG CTCCGACCCT CCGTGAAGGC
GCTGCGAAGC TCGACAAGAA CTCGGCCTGG CGCCAGCTCG TCGACGACGG CATCTCGGCT
GAAGACCAGC ACTCGAAGAT GACCGACGCC CTCGAAGCCC ACGACTGGCT GCACGGCTCG
CTCGCCCGTT CGGAAGCTTC GATCAACTCG CGTCTGGCCA GCGGCCTGCC GTTCCTCGCG
ACCGTCGGTG CAACCTCGCC GTTCATCGGT CTGTTCGGTA CCGTGGTCGG CATCTACCGC
GCTCTGATCA ACATCGGCCT CGCCGGTTCG GCCTCGATCG ACAAGGTCGC TGGCCCGGTC
GGTGAAGCTC TGATCATGAC CGCGCTGGGT CTGCTCGTCG CCGTTCCGGC CGTGCTTGCC
TACAACTGGC TGCAGGCTCG CAACAAGCGC ATCGCCGAGC TGCTCTCGGG CTTCTCGACC
GACGTTCTTG CGAACATCAA CTCGAAGGGC ACCGTCAAGC CGGCAATCGC TGCTGCTCCG
GCGACCCCGG CCGCTCCGGT CAAGAAGTAA
|
|---|
| Protein sequence | MSIYTLAAAA GGAAPQNKFG FAEALQQGGF IAYATVVILG IMSFGSFFIL FTKFFEQNKI
LGQYKTIRTT FWKAPTLREG AAKLDKNSAW RQLVDDGISA EDQHSKMTDA LEAHDWLHGS
LARSEASINS RLASGLPFLA TVGATSPFIG LFGTVVGIYR ALINIGLAGS ASIDKVAGPV
GEALIMTALG LLVAVPAVLA YNWLQARNKR IAELLSGFST DVLANINSKG TVKPAIAAAP
ATPAAPVKK
|
|---|
| |