Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0006 |
Symbol | |
ID | 3916048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 5121 |
End bp | 5816 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640442731 |
Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
Protein accession | YP_495289 |
Protein GI | 87198032 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.179819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGCG ACCAGATATT CGAGTTCTTC CGCCGACTTG CCGAGGCAAA CCCCTCGCCC GAGACCGAGC TGGAGTTCGG CAACGTCTAC CAGTTGCTGG TCGCGGTGAC GCTTTCGGCG CAGGCGACCG ACGTCGGCGT CAACAAGGCC ACCCGCAAGC TGTTCCAGAT CGTCAAGACG CCGCAGGACA TGCTGGATCT TGGCGAGGAA GGCCTGAAGG AACACATCAA GACCATCGGC CTGTTCAATT CCAAGGCCCG GAACGTCATG GCCATGGCCG AAATTCTCGT GCGCGAGCAT GGGGGCGAAG TGCCGGCCGA CCGCGACCTG CTGACCGCGT TGCCAGGCGT GGGCCGCAAG ACCGCCAACG TCGTGCTGAA TTGTGCGTTC GGCGCGGAAA CATTTGCGGT CGACACACAT ATCTTCCGCG TGGGCAACCG CACCGGCCTT GCGAAGGGCA AGACGCCGCT GGCGGTGGAG AAGCAGCTCG AGCGCAAGGT CCCCGGTCCG TTCAGGGTCG GTGCGCACCA CTGGCTGATC TTGCACGGCC GCTATGTCTG CAAGGCGCGT ACGCCCGAAT GCTGGCATTG CGGGGTGGTT GACCTTTGCG GCTACAAGGC GAAGGTTCTG GAAAAGGGGG CAATGCCGGC TGGCGCGAAG AAGGCGGTGG CCGTCAAGAA GGAGAGCAAG GCATGA
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Protein sequence | MTRDQIFEFF RRLAEANPSP ETELEFGNVY QLLVAVTLSA QATDVGVNKA TRKLFQIVKT PQDMLDLGEE GLKEHIKTIG LFNSKARNVM AMAEILVREH GGEVPADRDL LTALPGVGRK TANVVLNCAF GAETFAVDTH IFRVGNRTGL AKGKTPLAVE KQLERKVPGP FRVGAHHWLI LHGRYVCKAR TPECWHCGVV DLCGYKAKVL EKGAMPAGAK KAVAVKKESK A
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