Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_5080 |
Symbol | |
ID | 5704215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5756209 |
End bp | 5756847 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641274472 |
Product | PadR-like family transcriptional regulator |
Protein accession | YP_001539813 |
Protein GI | 159040560 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.6626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000475922 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCTCGAGT TCGCCATCCT CGGCCTCCTA CAGGAAGCTC CGATGCACGG ATACGAGCTG CGTAAGGAGC TGGCCGCTAA ACTCGGCGCG ATCCGGGCGG CCATCAGCTA CGGCACGCTG TACCCGACTC TGCGCCGCCT ACAGGCGGCG GGCTGGATCA CCGAGGCCAC CGAGACACCC GCCACCGCCC CAGAGGTCCC CGCGCTGACC AGCCGCCGTG GCCGCGTGGT CTACAAGATC ACCGCGGAGG GCAAGGAACG ATTCGCCCAG CTCATCGCCC AGGCCGGACC CGAGACATAC GACGACACGG GGTTCGGCGT GCACTTCGCG TTCTTCGCCC GAACCGACCA GGCAACCCGA CTTCGCATCC TGGAGGGTCG CCGCCGCAAG ATCGAGGAGC GCCGCGAAGG GCTCCGCGAC GTACTCGGTC GCGCCGCCGA GCGGCTCGAC GCGTACACCC TGGAACTGCA ACGCCACGGC CTGGATGCCT GTGAGCGTGA GGTCCGCTGG CTGGAGGAGC TCATCGCCAA CGAGCGCTCC GGCCGTGCCC CGACGGCCCC GGTCACCGGG ACGGACGGCG GCCGACCAGA AGACAACAGC CCGCCTCCGC CTGGAGAGTC CAGGAAAGAG CGGCCGTGA
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Protein sequence | MLEFAILGLL QEAPMHGYEL RKELAAKLGA IRAAISYGTL YPTLRRLQAA GWITEATETP ATAPEVPALT SRRGRVVYKI TAEGKERFAQ LIAQAGPETY DDTGFGVHFA FFARTDQATR LRILEGRRRK IEERREGLRD VLGRAAERLD AYTLELQRHG LDACEREVRW LEELIANERS GRAPTAPVTG TDGGRPEDNS PPPPGESRKE RP
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