Gene Sare_5012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_5012 
Symbol 
ID5705467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5681383 
End bp5682147 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID641274405 
ProductABC transporter related 
Protein accessionYP_001539746 
Protein GI159040493 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000281366 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGCAG AGCTCCCTGC CCTCGTGCTG CGTGGTCTGG TCAAACGCTT CGACAGCACG 
GTCGCGGTGG CCGGCGTCGA CCTGACCGTG CCGGCCGGCT CGTTCTACGG GCTACTCGGG
CCGAACGGCG CCGGCAAGAC CACCACGCTG TCGATGGCGG TGGGCCTGCT CCGACCGGAC
GCCGGCGATG TCCGGGTGCT CGGCCACGAT GTCTGGCGCG ACCCGGTTCG GGCGAAGCAG
CTACTCGGTG TCATGCCCGA CGGCGTACGC CTCTTCGACC GGCTGACCGG CGCCGAGTTA
CTCGCGTACC ACGGCCTGCT GCGGGGCATG GACCCGACGG TGGTCGATCA GCGCGCGGCG
GAACTACTGG ACGTACTCGC GCTCGGCGAC GCGGGGCGGA CCCTGGTGGT CGACTACTCG
GCTGGCATGA AGAAGAAGAT CGGTCTGGCC TGCGCGCTGC TGCATGGGCC CCGCCTGCTC
GTGTTGGACG AACCATTCGA GGCGGTCGAC CCGGTATCGG CGGCGCTGAT CCGGGACATC
CTCGGGCGGT ACGTGGCCGG GGGTGGCACA GTCGTCTTCT CCAGTCATGT GATGGAGGTC
GTGGAGCGAC TCTGCTCCCA CGTGGCGATC CTCGCCGCCG GCGCCATCAA ACAGGTCGGC
ACGCTTGACG AGGTCCGCGG GGACCGCACG CTGGAGCAGG TCTTCGTGAC AGTCGTGGGC
GGGCGGTCGG CGACCGGCGA GGAGCTCGCG TGGCTGTCGC GGTAA
 
Protein sequence
MTAELPALVL RGLVKRFDST VAVAGVDLTV PAGSFYGLLG PNGAGKTTTL SMAVGLLRPD 
AGDVRVLGHD VWRDPVRAKQ LLGVMPDGVR LFDRLTGAEL LAYHGLLRGM DPTVVDQRAA
ELLDVLALGD AGRTLVVDYS AGMKKKIGLA CALLHGPRLL VLDEPFEAVD PVSAALIRDI
LGRYVAGGGT VVFSSHVMEV VERLCSHVAI LAAGAIKQVG TLDEVRGDRT LEQVFVTVVG
GRSATGEELA WLSR