Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_5011 |
Symbol | |
ID | 5705466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5679579 |
End bp | 5681219 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641274404 |
Product | Na+/solute symporter |
Protein accession | YP_001539745 |
Protein GI | 159040492 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000410087 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGACAACA GCTACGTCGT CCCGGCGATC GTCACGGTCA CCCTGGTCAC CGTCGGCATC GGCTTCTACG GTCTACGGCT CGCCCGCACC ACCTCGGACT TCCTGGTGGC GTCCCGGGTG GTCAGCCCGA CCTGGAACGC CGCCGCGATC GGCGGGGAGT ACCTGTCGGC CGCCAGCTTC CTCGGCGTCG CCGGCCTGAT CCTCACGTAC GGCGTCGACG TGCTCTGGTA CCCGGTCGGC TTCGCCGCCG GGTACCTGGC CCTCCTCCTC TTCGTTGCCG CGCCGCTGCG CCGCTCCGGG GCGTTCACCC TTCCAGACTT CTGCGAGCTA CGGCTGGGCT CCCGGTGGCT GCGCACCCTC GCCACCGCCT TCGTGATCTT CATCGGTTGG CTCTACCTCG TCCCCCAGTT GCAGGGTGCC GGGCTGACCA TGGCCACGTT GACCGGCTCG CCCTACCCGC TGGGGGCGCT CCTGGTCGCG GCGGTGGTCA CCGCGAACGT GGCGCTCGGC GGCATGCGTG CGATCACCTT CGTCCAGGCG TTCCAGTACT GGCTCAAGCT GACCGCACTC GCCGTACCGG CGATCTTCCT GGTGTTGCAG TGGCAGGCCG ACGCCCGCCC GGCGGTCACC CCACCGGAGG GCCCGACGTT CCGCGCCGCG ACCACCGTCG TGGTCGAGCA TCCCGCCACC CTCACCCTGC CCGACGGTCA GGTGCGGGAG GTACACCCCG GCGACGAGTT GACCTTCGCT GCGGGAGATT CGGTGCCCGA CGTGAGCGGG ACCGCCATCG ACGCGGCCGA CTGGTTGCTG CCCAGCACCG TCGGGAGCGA CGACCGGGGC CTGTTCACCA CCTACTCGCT GATCCTCGCC ACGTTCCTCG GCACCATGGG ACTGCCGCAC GTGCTGGTGC GCTTCTACAC CAACCCGGAT GGTGCCGCCG CCCGCCGCAC CACCCTGGTG GTGCTGGCCC TGGTCGGCGC CTTCTATCTG CTGCCGACCA TCTACGGGGC GCTCGGTCGG ATCTACACCC CGCACCTGTT GCTCACCGGG CAGACCGACG CGGTGGTGTT GCTGCTGCCC GGCGCGGCGC TGGGTGACGG CACCGCCGGT CGGCTCCTCG CCGCACTCGT CGCCGCCGGG GCGTTCGCAG CGTTCCTTTC CACCTCCTCC GGCCTGCTTA CCAGCGTTGC CGGGGTGATC TCCACAGACG TGCTGGGCCA CGGCTCGGTC CACGGGTTCC GACTGGCCAC GGTACTCGCC GGCAGCGTGC CCACGGTGCT CGCGCTCAAC GTGTCCGGGC TGGACGTGTC GCAGGTGGTG GGGCTGGCGT TCGCGGTGGC CGCGTCGAGC TTCTGCCCCC TACTGGTGCT GGGAATCTGG TGGCGGGGCC TGACCGACCG CGGCGCGGCC GCCGGAGTGT TGATCGGCGG CGGCGCCGCG GTCGGGGCGG TGCTGGTGAC CGTGCTCGGC CCGCCGCTGT CCGGGTGGCC GGCCACGCTC GTCGCGCAGC CGGCCGCCTG GACGGTTCCG CTCGCCTTCA CCGTGATGGT GGTGGTGTCG ATGACCACCC GTCACCGCGT CCCGACCGAC GTCGGCGCCA CGATGCTCCG CCTACACGCC CCCGAAGCCC TACGGCCGTA G
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Protein sequence | MDNSYVVPAI VTVTLVTVGI GFYGLRLART TSDFLVASRV VSPTWNAAAI GGEYLSAASF LGVAGLILTY GVDVLWYPVG FAAGYLALLL FVAAPLRRSG AFTLPDFCEL RLGSRWLRTL ATAFVIFIGW LYLVPQLQGA GLTMATLTGS PYPLGALLVA AVVTANVALG GMRAITFVQA FQYWLKLTAL AVPAIFLVLQ WQADARPAVT PPEGPTFRAA TTVVVEHPAT LTLPDGQVRE VHPGDELTFA AGDSVPDVSG TAIDAADWLL PSTVGSDDRG LFTTYSLILA TFLGTMGLPH VLVRFYTNPD GAAARRTTLV VLALVGAFYL LPTIYGALGR IYTPHLLLTG QTDAVVLLLP GAALGDGTAG RLLAALVAAG AFAAFLSTSS GLLTSVAGVI STDVLGHGSV HGFRLATVLA GSVPTVLALN VSGLDVSQVV GLAFAVAASS FCPLLVLGIW WRGLTDRGAA AGVLIGGGAA VGAVLVTVLG PPLSGWPATL VAQPAAWTVP LAFTVMVVVS MTTRHRVPTD VGATMLRLHA PEALRP
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