Gene Sare_4996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4996 
Symbol 
ID5705736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5665055 
End bp5665585 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID641274389 
Productpeptidylprolyl isomerase 
Protein accessionYP_001539730 
Protein GI159040477 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.120878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000125843 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCGAGG ACGTCTACGC CACCCTGCAC ACCAACGCCG GCCCGATCCG GCTGCAGCTC 
TTTCCGAACC ATGCGCCGAA GACCGTCCGC AACTTCGTGG AGTTGGCCGA GGGTACCCGG
CAGTACACCG ACCCGCGGAC CGGCCAACCG GGCAGCGGAC CGTACTACGA CGGCACCATC
TCGCACCGCG TGATCAGTGG TTTCATGATC CAGATGGGCG ACCCGACCGG CACCGGACGG
GGTGGCCCGG GTTACACGTT CGCCGACGAG TTCCACCCTG AGCTGCGCTT CGACCGGCCG
TACCTACTGG CGATGGCGAA TGCCGGGCCG GGCACCAACG GTTCGCAGTT CTTCATCACG
GTGGCGCCGA CCCCGACCCT GACCAACCGG CACACCATCT TCGGGCAGGT CGCCGACAAC
GAGTCGGCGA AGGTCGTCGA CTCGATCGCC AACACCCCGA CGAGTCCCGC CGACCGCCCG
CTGCAGGACG TCGTCATCGA GCGGGTCGAG ATCGAGCGCA CCGGCTCCTG A
 
Protein sequence
MAEDVYATLH TNAGPIRLQL FPNHAPKTVR NFVELAEGTR QYTDPRTGQP GSGPYYDGTI 
SHRVISGFMI QMGDPTGTGR GGPGYTFADE FHPELRFDRP YLLAMANAGP GTNGSQFFIT
VAPTPTLTNR HTIFGQVADN ESAKVVDSIA NTPTSPADRP LQDVVIERVE IERTGS