| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4990 |
|---|
| Symbol | |
|---|
| ID | 5706139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5659437 |
|---|
| End bp | 5660123 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641274383 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001539724 |
|---|
| Protein GI | 159040471 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.866601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000134834 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTCG ACGCGCCACA TCGCGGGCTC GTCCTCCTCG TCGAGGACGA AGCGACCATC
GCCGACCTGG TCCGGCTCTA CCTGAACCGG GACGGTTTCG GCGTACATCT GGAGCGTGAC
GGTGACGCCG GACTCGCCGC CGCCCGCCGA CTCCGACCGG TGGCCTGCGT GCTCGACATC
GCGCTACCCG GCCTGCCCGG CACCGAGATC TGCCGCCGGC TACGCGAAGC GGGCGACTGG
ACACCGGTCA TCTTCCTCAC CGCGCGCGAC GACGAGGTGG ACCGCGTCGT CGGGCTCGAG
CTCGGCGCGG ACGACTACGT CACCAAACCG TTCAGCCCCC GTGAACTGGT GGCCCGGCTG
CGGGCGGTGC TACGCCGCGT CGCCGGGCCC CCACCGGGCC AGCCGCGGAG GGTCGGTGTG
GTCACGCTGG ACCCGGACCG CCGTACGGTG ACCGCGGCGG GTGATCCCGT GCAGCTGACC
TCCACCGAGT TCGACCTGCT CGCCCACCTG ATGGCACGCC CCGGGCGGGT GTTCACCCGG
GAGGAACTGC TCGCGGGTGT GTGGGGGTAC GCCGTCCCCG CCGGTACCCG CACCGCCGAC
GTGCACGTGG CGCAGGTCCG GGCGAAGCTC GGCTCGGCGA GCGTGATCCG CACCCATCGG
GGCGTGGGGT ACGCCGCCGA TGCGTGA
|
|---|
| Protein sequence | MIVDAPHRGL VLLVEDEATI ADLVRLYLNR DGFGVHLERD GDAGLAAARR LRPVACVLDI
ALPGLPGTEI CRRLREAGDW TPVIFLTARD DEVDRVVGLE LGADDYVTKP FSPRELVARL
RAVLRRVAGP PPGQPRRVGV VTLDPDRRTV TAAGDPVQLT STEFDLLAHL MARPGRVFTR
EELLAGVWGY AVPAGTRTAD VHVAQVRAKL GSASVIRTHR GVGYAADA
|
|---|
| |