| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4928 |
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| Symbol | |
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| ID | 5707075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5593171 |
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| End bp | 5593770 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641274324 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_001539666 |
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| Protein GI | 159040413 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.358749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.255355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAACAGCC GCGAAGCCCA CCTGGTCGAG TTGGTGGACG ACAACGGTCA GGTGACCGGC
CAGGCCACCG TGTCCGCCGC GCACCAGCTG CCGGGGAAGT TGCACCGCGC CTACTCGGTG
CTGCTCGTCG ACCCGGCCGG CCGGGTCCTG CTCCAGCGCC GGGCCGCGGC GAAGACCCGG
TTCCCACTAC GGTGGGCCAA CTCCTGCTGC GGCCACCCGC CGCCCGGCGA GCCGCTGGCC
GCCGCCGCCA ATCGCCGGCT CCGCGAGGAG TTGGGCGTCG GCCCGGTCGA GCTGACCGAG
ATCGGGGTGT ACGTCTACCA CGCCGAGGAC CCGGCCACCG GCAAGGTCGA GTTCGAGTAC
GACCACATCC TGCGCGGCAG CCTGCCGACG GACACACCAC TGCACCCGGA TCCGGACGAG
GTAGCGGAGC TGCGCTGGGT GATCCCGTCC GAACTGGCGG CGGACATCGA CGCCAACCCG
TACGCGTACG CCCCCTGGCT GGGTGAGGTC CTCCACCGGC TGATCCAACT GGGAGAACCC
ACCGCGCTCC GACCCGGTCG GGCGGGCGAG GACGTTCCGG AGCGGTCAGG TGGCGGATGA
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| Protein sequence | MNSREAHLVE LVDDNGQVTG QATVSAAHQL PGKLHRAYSV LLVDPAGRVL LQRRAAAKTR
FPLRWANSCC GHPPPGEPLA AAANRRLREE LGVGPVELTE IGVYVYHAED PATGKVEFEY
DHILRGSLPT DTPLHPDPDE VAELRWVIPS ELAADIDANP YAYAPWLGEV LHRLIQLGEP
TALRPGRAGE DVPERSGGG
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