Gene Sare_4796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4796 
Symbol 
ID5704003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5428712 
End bp5431138 
Gene Length2427 bp 
Protein Length808 aa 
Translation table11 
GC content67% 
IMG OID641274194 
Productglycosyl transferase family protein 
Protein accessionYP_001539540 
Protein GI159040287 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.686979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.170085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAC GTGACCACAG CATGCTGACC AACGCCGCAT CGCTACTCAT CTGCGGCCTA 
CTGGCCGGAG TAGTGGTCGC CGCGGCGGCC TTCCCCGCAG TGGCGCTGTC CGGGCTGGCC
GCGAAGGCCG GCTCCGAGAC CTTCGACGCC CTACCCACCG AACTGGCCGT GGGCCCCGGG
CCCCAGATGA GCCGCCTCCT CGCCGCTGAC GGCAAGACAC CACTGGCCAC CATGTACGAC
GAGAACCGTC GCGACATCAA CAAGATCGAC GACGTCGCAC CGGCCATGCG GAAGGCGATC
ATCGCCGCCG AGGACCACGA CTTCTACCAG CACAACGGCG TCGACCTGAA CGGCGTCGCC
CGCGCCTTCG TCAACAACAG CCAGGAGGGC TCCTACCAGC AGGGCGCCTC CACGCTGACG
ATGCAGTACG TCCGACTCGC CATCGCCTAC TCGGCGACCC ACCCGGCCGA CGTGGTCGCG
GCAACCGAGG ACACCAACGC CCGCAAGCTG CGCGAGATGC GCTACGCCGT GCAGATCGAG
AACGAGTTCT CCAAGGACGA GATCCTGCTG CGCTACCTCA ACATCGCCTC GTTCGGCAAC
GGCGCGTACG GCATCTACGC CGCCAGCCAG GTCTACTTCG CCAAGTCGCC GAGCAAACTC
ACCATCTCCG AGGCAGCACT GCTCGCCGGC CTGGTCAAGG CGCCCAGCAC GTTGGACCCG
ACCACCCGCA GCGGCTACCC GCAGGCCCTG GCCCGGCGCG ACTACGTGCT CGACAACATG
CTCGAGATCG GCGCCATCAC CGCGGACGAG GCCGAGAAGG CCAAAGCCAA CCAGCCGAAG
ATCGTCGGCA AGCGGGCACC GAACGGCTGC GTCGACACCA ACACGAAGGA GTGGGGGTTC
TTCTGCGACT ACTTCTACCG CTGGTGGATG ACGCAGGAGG CCTTCGGCTC CACCACGTAC
GACCGCGAGC GGCGCCTCAA GAGCGGCGGC TTCACCATCA TCACCACGAT GGAGCCCCAG
GTCCAGAAGG CCGCCGACCA GGCGGCGCGG AGGAACCTCT CCGCCAACAG CAAGGCCGCG
CGGATGCTCG CGGTGGTCGA GCCCGGCACC GGACGGGTCC GCGCGCTGGC GACCAACCGC
AACTACAAGC TCGACGACCC GAACAACCCC GCCAACAAGC CACACAGCGA TCCGAAGCAG
CAGAAGAACG GCAGACTGGG CAACTATCCG AACACCGTCA ACCCGCTCCT CAGCGGCGGT
GACGGCATCA GCGGATACCA GGCCGGCTCG ACCTTCAAGA TCTTCACCAT CGTGGCGGCA
CTGGAGAAGG GCATCCCGCT CAGCCACACC ATCAACGCCG AAAGGGAGTT CCGGTCCGAA
TACATCGTCG CCAGGAACGG CACGGCGGCC TGCAAGAACA CTCACTTCTA CTGCCCGACC
AACGCGAGCG ACAGCATGGT CGGCGTGCAC AACATGTGGA GTGCGTTCGG TCGCTCGGTG
AACACCTACT TCGTCCCCCT ACAGCAGCAG GTGGGCGCGG AGAACGTGGT CGAGGCCGCC
CAGAAGCTCG GCATCACCTT CCGGGACCAG GACGACTTCA ATCGGGCGGA GGACAAGGAC
CAAGCCCACC AGTGGGGCCC CTTCACCCTC GGCGTCTCCC AGACCACGCC ACTGGACCTG
GCCAACTCGT ACGCCACCCT CGCCGCCGAA GGGCTGTACT GCGAGCCGAT CCCGGTGCAG
GAAATCCGCG ACCCAGAAGG CAACAAGCTC GACATCGCCG ACCCGCGCTG TGAACAGCGG
ATCAGCACCG AGGTAGCTCG TGCCGCCGTT GACGCCGCCC GCTGCCCGGT CGGCGACCGC
TCGTCCACGT CGAGGTGCGC CGGCGCGACC GCGCAAAACG TGCGGGGCAT CGTCGACGCC
CCGGTCGCCG GCAAGTCCGG CACCACCGAC AAGGACAAAA CCGCCTCCCT GGTCGCGATG
ACCAAGCAGT ACTCGGTCGC CGGCATCATG GCCGACCCGG ACTGGCCGCA GACCACCCAG
AGGATGGGCC ACAACGAGCC CAAGGGCATC AACCCACCGG TTTACGAGAC GCTGCGCGAC
GCCATGAAGG GCAAACCCCG CATCGACTTC ACCCCGCCGG GTGACAAACT CCGCTACGGA
GACCAGCGGC GGATCCCGAA CGTCAAGTGC ATCAGCGTGG AGAAGGCAAA GTCTCGCATC
TCGGGCGCCG GATTCGTGGC GGTCGTCGGC CGGAACCAGG TCGAGTCGAA CTGTCCGGCC
GGCACCGCCG CCGGGACCAG CCCGGACGGT CGCACCGCCA AGGGCAGCGT CGTCACCATC
AAGGTCAGCT CCGGTCCCGC TCCAGAGCCG ACGACAACGC CGGAAGGGCG ACCCGGAGGC
AGACCAACGG AACGTCCCAC CGACTGA
 
Protein sequence
MRKRDHSMLT NAASLLICGL LAGVVVAAAA FPAVALSGLA AKAGSETFDA LPTELAVGPG 
PQMSRLLAAD GKTPLATMYD ENRRDINKID DVAPAMRKAI IAAEDHDFYQ HNGVDLNGVA
RAFVNNSQEG SYQQGASTLT MQYVRLAIAY SATHPADVVA ATEDTNARKL REMRYAVQIE
NEFSKDEILL RYLNIASFGN GAYGIYAASQ VYFAKSPSKL TISEAALLAG LVKAPSTLDP
TTRSGYPQAL ARRDYVLDNM LEIGAITADE AEKAKANQPK IVGKRAPNGC VDTNTKEWGF
FCDYFYRWWM TQEAFGSTTY DRERRLKSGG FTIITTMEPQ VQKAADQAAR RNLSANSKAA
RMLAVVEPGT GRVRALATNR NYKLDDPNNP ANKPHSDPKQ QKNGRLGNYP NTVNPLLSGG
DGISGYQAGS TFKIFTIVAA LEKGIPLSHT INAEREFRSE YIVARNGTAA CKNTHFYCPT
NASDSMVGVH NMWSAFGRSV NTYFVPLQQQ VGAENVVEAA QKLGITFRDQ DDFNRAEDKD
QAHQWGPFTL GVSQTTPLDL ANSYATLAAE GLYCEPIPVQ EIRDPEGNKL DIADPRCEQR
ISTEVARAAV DAARCPVGDR SSTSRCAGAT AQNVRGIVDA PVAGKSGTTD KDKTASLVAM
TKQYSVAGIM ADPDWPQTTQ RMGHNEPKGI NPPVYETLRD AMKGKPRIDF TPPGDKLRYG
DQRRIPNVKC ISVEKAKSRI SGAGFVAVVG RNQVESNCPA GTAAGTSPDG RTAKGSVVTI
KVSSGPAPEP TTTPEGRPGG RPTERPTD