Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4759 |
Symbol | |
ID | 5707476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5387838 |
End bp | 5388650 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641274157 |
Product | endonuclease III |
Protein accession | YP_001539503 |
Protein GI | 159040250 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.033358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00175385 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGCGG CTAGGCCACG TAGGCTGGCT GGCGTGACCA CCAGCATCAG GGAGACCGAC CTCGGTCGGA CACGCCGCGC CCGCCGGATC GGGCGGGTGC TGGCCGACAC CCACCCCGAC GCGCACTGCG AACTCGACCA CTCCAATGCG CTGGAGTTGG CCGTCGCGAC GATCCTCTCC GCCCAGTGCA CGGACAAAAG GGTCAACGAG GTCACTCCAA AGTTGTTCGC CCGCTATCGG CAGGCAGCCG ACTACGCCGG TGCCGACCGG GCCGAGCTGG AGGAGCTGAT CCGGCCCACC GGGTTCTACC GGAACAAGAC CGATTCACTG ATCAAGCTGG GTCAGGGGCT GGTCGAGAGG CACGACGGCC GGGTACCCGG AAAACTCACC GACCTCGTGC ACCTGCCCGG AATCGGCCGC AAGACGGCGA ACGTTATTCT CGGCAACGCG TTCGACGTAC CGGGGATCAC CGTCGACACC CACTTCAACC GGCTGGTGCG GCGGTGGCGC CTGACCACCG AGACCGACCC CGTCAAGATC GAGCATGCGA TCGGTGCGCT CTACCCGAAG CGCGACTGGA CGATGCTGTC GCACCGGATC ATCTTTCACG GGCGCCGGGT CTGCCACGCC CGTAAGCCGG CATGCGGCGC GTGTACCCTC ACGAAGCTCT GCCCGTCGTA CGGCACCGGG CCGACCGAGC CGGCAGCGGC CGCGAAGCTG CTCAAAGGCC CACGTGCCCA GGAGCTCGCG GCAGCCGCCG GAGTGGACCC AGAACTGGTG CCCGTCGGGA ACGTGCGGGC GGAGGCGCCG TGA
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Protein sequence | MTAARPRRLA GVTTSIRETD LGRTRRARRI GRVLADTHPD AHCELDHSNA LELAVATILS AQCTDKRVNE VTPKLFARYR QAADYAGADR AELEELIRPT GFYRNKTDSL IKLGQGLVER HDGRVPGKLT DLVHLPGIGR KTANVILGNA FDVPGITVDT HFNRLVRRWR LTTETDPVKI EHAIGALYPK RDWTMLSHRI IFHGRRVCHA RKPACGACTL TKLCPSYGTG PTEPAAAAKL LKGPRAQELA AAAGVDPELV PVGNVRAEAP
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