Gene Sare_4752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4752 
Symbol 
ID5705343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5377536 
End bp5378939 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content75% 
IMG OID641274150 
Producthypothetical protein 
Protein accessionYP_001539496 
Protein GI159040243 
COG category 
COG ID 
TIGRFAM ID[TIGR02958] secretion protein snm4 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000148425 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGTCG GCCTGGCCCG GGTCACCATC AACGCTCCGC ACCGGCGGCT TGACGTGGCC 
CTGCCAGCGC AGGTCCCCCT CGCCGACCTG CTTCCCGAGG TGCTGCGACA CGCAGGCGAA
GGGCTCGCCG ACGACGGCGA GCGGCACGGC GGCTGGGTGC TGCGGCGCAG CGACGGTGGG
GAACTGGCCA CCGCCCAGCC GTTGCAGCCC CAGGGCGTTC GCGACGGCGA GGTGCTGCAC
CTGGTGCCGG CCCGCGCGCG GTGGCCGGAA CTGGAGTACG ACGATGTGGT CGAGGCGATC
GCCGACGGGG CGCGGCGGCG CGGCGGCGCC TGGTCGCCGG TGAGCACCCG GGTCGCGACC
CTCGCCGGCG CGGCAGTCCC GTTAGCCGTC GGGCTACTCG CCGTGACTGC CGCTGGACCC
GGTCACTTCG CGGGTTGGCC GGTCGCCGCT GTGGTCGCCG TGCTGCTGAC CCTTGCCGGT
ACGGCGGCCG CCCGGGCATA CGGGGACGGA ACGGCGGGCG CCACCCTGGC CGGATACGCG
CTGCCGTACG CCGCTGTGGC CGGTGCGCTC GCGGTCAGCA GCGGAGACCA CGTGGGCCTG
CTGCCCGGGC TGCGTTGGCT CGGCGTACCC GAACTGCTCG CCGGTGCGAC GTCGCTCTTG
CTGGTCTCGG TGCTCGCCCT GGTCGGCGTC GCGGCCCGGG CGCGGGTGTT CGTCGCTGGT
GTGGTCGTCG GGCTCGGTGG CGTGCTGGGC GCGGCGGGCG GGCTGGTGGT TGACGCCGCC
GGTGCCGCCG CAGTGCTGCT CGCCGGGCTC GTCTTCGCGG TCGGGGCGAT TCCTCTCCTG
GCCATTCGGC TCGGCAAGGT GCCACTGCCA CCGATCACCC TGCCTGTCGA GGACCTGGAT
GGCGGCTCCT TTCCGGCGCG GGACCTGCCG GACCGGGAGC GGGTGCACGC CGCGGTCGCC
CGGACCGAGG AGGTGCTGAC CGGGATGTTC CTCGGGCACG CTGCGCTGGC GGCCGTTGCC
GCGGTGTTGC TCGGGTTCAC CGGCGGAACC GCTGGCTGCG CGTTGGTCGC CGTTACCGCG
ACGCTCCTGC TGCTGCGTGC CCGGCTCTTC GTGGCGGTAC GACACCGGGC GCCGGCCGTG
GTCGCCGGGC TCGCCGGCTA CGCCGTGCTC GGCGTCGCGC TGGCCAACCG GTTCGGTACC
GACCTGCTGC CCATGCTGAC CCTCGGCGGA CTGGCACTGG CTCTGGCCGC TGTCGCGGCC
GGCCACACCT ACGCGCGACG GCCGGTGTCG CCGTATGCCG GCCGAATCGC CGACCTGGCC
GACACCGCCT TGGTGGTTTC CGTGGTCCCG GTCGCCTGCG CCGTGCTGGA CCTGTACGAA
CGGGCCCAGG GGCTGCTCGG TTGA
 
Protein sequence
MTVGLARVTI NAPHRRLDVA LPAQVPLADL LPEVLRHAGE GLADDGERHG GWVLRRSDGG 
ELATAQPLQP QGVRDGEVLH LVPARARWPE LEYDDVVEAI ADGARRRGGA WSPVSTRVAT
LAGAAVPLAV GLLAVTAAGP GHFAGWPVAA VVAVLLTLAG TAAARAYGDG TAGATLAGYA
LPYAAVAGAL AVSSGDHVGL LPGLRWLGVP ELLAGATSLL LVSVLALVGV AARARVFVAG
VVVGLGGVLG AAGGLVVDAA GAAAVLLAGL VFAVGAIPLL AIRLGKVPLP PITLPVEDLD
GGSFPARDLP DRERVHAAVA RTEEVLTGMF LGHAALAAVA AVLLGFTGGT AGCALVAVTA
TLLLLRARLF VAVRHRAPAV VAGLAGYAVL GVALANRFGT DLLPMLTLGG LALALAAVAA
GHTYARRPVS PYAGRIADLA DTALVVSVVP VACAVLDLYE RAQGLLG