Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4747 |
Symbol | |
ID | 5705338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5371854 |
End bp | 5372816 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641274145 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001539491 |
Protein GI | 159040238 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000169446 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCCGCT CCGTCGCCGT CATCGCCCTC GACCGAGTCG CCCCCTTCGA GCTCGGCGTA CTGGCCGAGG TCTTCGGCAC CGACCGCACC GCCGACGGCT TCCCGGGCTA CCGCTTCACC GTGTGCACCG TCGACGGTGG CCCGGTCCGC ACCTCGTCCG GCTTCCACCT CACCCCGCAC GGCGACCTGA CCGCGGTCGA CGAGGCCGAT CTGGTGGCCG TGCCCGCGCA CCCCCGGGAC TCACCTGTTC CGCCGGCCGC ACTCGCCGCG CTCCGCCAGG CTGCCGAACG AGACGCGTAC GTGTTCAGCG TCTGCTCCGG CGCCTTCGTA CTCGGCGCCG CCGGGCTACT CGACGGACGC GAATGCACCG CCCACTGGGC GCACGTCGAC GAGTTGCGAC AGCGCTACCC CGCGGCGAGG GTGCGGTGCA ACTCCCTCTA CGTCGCGGAC GGACGGCTGA TCACCAGCGC CGGCACCGCC GCCGGCATCG ACGCCTGCCT ACACCTGGTC CGGCAGGAAC ACGGGTCGGC GATCGCCACC CGGCTGGCCC GCCGAATGGT GGTCCCCCCA CACCGGGACG GCGGGCAGTC CCAGTACGTC GAGACCCCGA TCTCCAGCGA GCCCGAGGCG CAGACCCTGG AGCCGGTACT GCAATGGCTG ATGGGCCACC TGAACCGGTC GCTGACCGTG GACGACCTGG CCGCCCGCGC CGACATGGCA CCCCGTACGT TCGCCCGCCG GTTCCGGGCG GAGACCGGCA CCACACCGCA CGACTGGCTC ACCAACCAGC GGGTGTTGCT CGCCCGACGG CTCCTGGAAG AGACCCGTCT CAGCATCGAG GAGGTGGCCG GCCGTACCGG CTTCTCCGAC GCCGCTGCCC TGCGCCACCA CTTCACCCGC CGGGTCGGGA CCACCCCGAA CGGCTACCGC ATCACCTTTC GGGACCGAAC GCCTGCCCGC TGA
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Protein sequence | MLRSVAVIAL DRVAPFELGV LAEVFGTDRT ADGFPGYRFT VCTVDGGPVR TSSGFHLTPH GDLTAVDEAD LVAVPAHPRD SPVPPAALAA LRQAAERDAY VFSVCSGAFV LGAAGLLDGR ECTAHWAHVD ELRQRYPAAR VRCNSLYVAD GRLITSAGTA AGIDACLHLV RQEHGSAIAT RLARRMVVPP HRDGGQSQYV ETPISSEPEA QTLEPVLQWL MGHLNRSLTV DDLAARADMA PRTFARRFRA ETGTTPHDWL TNQRVLLARR LLEETRLSIE EVAGRTGFSD AAALRHHFTR RVGTTPNGYR ITFRDRTPAR
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