Gene Sare_4669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4669 
Symbol 
ID5704848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5289531 
End bp5290253 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content75% 
IMG OID641274067 
ProductSNARE associated Golgi protein 
Protein accessionYP_001539413 
Protein GI159040160 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAACA ATTCGGCTGG GCCCGAGGCG GCGTCGCGGT TTCTCCGGAT CGTCGGCTCG 
CCGTGGCCGA GGCTGGCGTT CCTGCTGTTC CTGTTGGCAG GCGCGGCGAC GCTGCTGGCC
ACCCAGGGCA CCCCGGACGT GGACACGCTG CGCGACCGCG TCGCCGCCAC TGGGCCCTGG
GCGCCGCTGC TGTTCACCGT CGGGTACGCC CTGGGCACCG TGCTACTGGT CCCCGGAGTG
CTGCTCACCG CCGCCGCCGG GGCGCTGTTC GGGGTGGTCG GCGGCTCGGT GGTGGTGCTG
GTCGGGGCAA CCGTGGGCGC GGTGGCGTCG TTCCTGCTCG GTCGGCTGCT GGGCCGCCCC
GCCGTGGAGC GGCTCGTCGG GGGCCGGCTG CAGCGCTTGG ACCGATTCCT GGCGCGGCGC
GGACTGGTCG CGGTGATCGG GCTGCGGCTC GTGCCGCTGG TCCCGTTCGC ACTGCTCAAC
TACGGCTCCG GGGTGACCGC CGTACGGCTG CGCGACTATG CCCTCGGCTC GGCGATTGGC
ATGATCCCCG GGATCGTCGC CTACACCGCG GTCGGTGGGT CGCTGACCGA TCCCACCTCG
CCGCAGTTCC TTCTCGCCGT GGCCGGTCTG GCCGCGCTGA CCCTGACCGG TGCGGCGGCG
GCACGCCGGG CCCGCCGTAG GGATTCCCGC GCGGCGCCGG CTGCCGAGGG GGCCGGCCAG
TGA
 
Protein sequence
MTNNSAGPEA ASRFLRIVGS PWPRLAFLLF LLAGAATLLA TQGTPDVDTL RDRVAATGPW 
APLLFTVGYA LGTVLLVPGV LLTAAAGALF GVVGGSVVVL VGATVGAVAS FLLGRLLGRP
AVERLVGGRL QRLDRFLARR GLVAVIGLRL VPLVPFALLN YGSGVTAVRL RDYALGSAIG
MIPGIVAYTA VGGSLTDPTS PQFLLAVAGL AALTLTGAAA ARRARRRDSR AAPAAEGAGQ