Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4669 |
Symbol | |
ID | 5704848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5289531 |
End bp | 5290253 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641274067 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001539413 |
Protein GI | 159040160 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAACA ATTCGGCTGG GCCCGAGGCG GCGTCGCGGT TTCTCCGGAT CGTCGGCTCG CCGTGGCCGA GGCTGGCGTT CCTGCTGTTC CTGTTGGCAG GCGCGGCGAC GCTGCTGGCC ACCCAGGGCA CCCCGGACGT GGACACGCTG CGCGACCGCG TCGCCGCCAC TGGGCCCTGG GCGCCGCTGC TGTTCACCGT CGGGTACGCC CTGGGCACCG TGCTACTGGT CCCCGGAGTG CTGCTCACCG CCGCCGCCGG GGCGCTGTTC GGGGTGGTCG GCGGCTCGGT GGTGGTGCTG GTCGGGGCAA CCGTGGGCGC GGTGGCGTCG TTCCTGCTCG GTCGGCTGCT GGGCCGCCCC GCCGTGGAGC GGCTCGTCGG GGGCCGGCTG CAGCGCTTGG ACCGATTCCT GGCGCGGCGC GGACTGGTCG CGGTGATCGG GCTGCGGCTC GTGCCGCTGG TCCCGTTCGC ACTGCTCAAC TACGGCTCCG GGGTGACCGC CGTACGGCTG CGCGACTATG CCCTCGGCTC GGCGATTGGC ATGATCCCCG GGATCGTCGC CTACACCGCG GTCGGTGGGT CGCTGACCGA TCCCACCTCG CCGCAGTTCC TTCTCGCCGT GGCCGGTCTG GCCGCGCTGA CCCTGACCGG TGCGGCGGCG GCACGCCGGG CCCGCCGTAG GGATTCCCGC GCGGCGCCGG CTGCCGAGGG GGCCGGCCAG TGA
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Protein sequence | MTNNSAGPEA ASRFLRIVGS PWPRLAFLLF LLAGAATLLA TQGTPDVDTL RDRVAATGPW APLLFTVGYA LGTVLLVPGV LLTAAAGALF GVVGGSVVVL VGATVGAVAS FLLGRLLGRP AVERLVGGRL QRLDRFLARR GLVAVIGLRL VPLVPFALLN YGSGVTAVRL RDYALGSAIG MIPGIVAYTA VGGSLTDPTS PQFLLAVAGL AALTLTGAAA ARRARRRDSR AAPAAEGAGQ
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