| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4666 |
|---|
| Symbol | |
|---|
| ID | 5704845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5286498 |
|---|
| End bp | 5287010 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641274064 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001539410 |
|---|
| Protein GI | 159040157 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACGAATTCCT GCGGGCGATG AACGAGCACC TGGAGCTGGT CTACAACCTG
GCCCGGCGGC TGACCCGCTC GCGGCCGCAG GCCGAGGACC TGGTGCAGGA GACGTACCTG
CGCGCGCTGC GGGGATGGCG GCGACAACCA CCGGACGACA TGCGGGCCTG GCTCGCGACG
ATCTGCCTGA ACGCCGCACG TGCCGGGTGG CGGTCCGAGT CCGTCCGTCC GGTCGAGGTC
CTCGACCCCG ATGCTGGGAC GACCCGAACG TCGCACAGCG ACACCGCAGG CGAGGCGATC
AGCGGGCTCA TTCGGGACCA GGTGCATCGC GCGCTGTGGC AGTTGCCCTC CGCGCAGCGG
GAGGCGATCA CGCTGATGGA CCTGTGTGGA TTCACCGCCG CCGAGGCCGC GGCCATGACG
GGTACACCAC GCGGCACGAT ACTGGCCCGG GTTCACCGCG GCCACAAGAA GCTCGTGGAG
CTTCTGCAAC GACAGGGGGT GACGTCGGAG TGA
|
|---|
| Protein sequence | MSDDEFLRAM NEHLELVYNL ARRLTRSRPQ AEDLVQETYL RALRGWRRQP PDDMRAWLAT
ICLNAARAGW RSESVRPVEV LDPDAGTTRT SHSDTAGEAI SGLIRDQVHR ALWQLPSAQR
EAITLMDLCG FTAAEAAAMT GTPRGTILAR VHRGHKKLVE LLQRQGVTSE
|
|---|
| |