Gene Sare_4620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4620 
Symbol 
ID5707682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5243179 
End bp5243892 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID641274022 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001539369 
Protein GI159040116 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.128051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGA GTCGTGGGGA TGGGATCCGG TCGATGCTGC GGGATGTGGC ATTGTTCAGT 
GAGTTGCCGG AGAGTCTTTT GGCGGCGGTG GCCGTGGATG CTCGGGAGCG ACGGCTGTTG
CGGGGCGAGG TGTTGTTCCG GGCGGGTGAG CTGTGTTCGG CGTTCTACTG TGTTCTGTCC
GGCCAGGTCA AGTTGACTGT GGCCGGTGGG GGTGGTGGGG AAAAGGTTCT GGAGATCGTC
GCGCCTGGTG AGACGTTCGC GGAGGCACTG ATGTTCGGGC ATCGGCCGTA CCCGGTGACA
GCCGTGGCGT TGTCCGCGAC ACGTCTACTG GTGGTCGGAT CCCGCACCGT CCATGATCTG
ATCGCGCAGG ATCCGGACTT CGCCCGGCTG ATGCTGGTGG GTATGTCGGT GCGGTTACAC
AGGCTGGTCA GGCAGATCGC GTCGGTGTCG TTGAGCAGTG CCGCTGAGCG GGTGGCTGAC
CTGTTGCTGT CGCTGGCTGG TCCGGAGGCG GGTGAGTCGG TGGTGGTGGA GCTGCCGGCG
GGTAAGGCGG TGCTGGCGTC GCGGCTGAAT CTGTCGCCGG AGCATTTCTC CCGGACGTTG
CGGGATCTTG CCGATACGGG CTTGATCCGG GTCGAGGGGC GTCGGGTGGC CGTGCTCGAC
GTAGCCCGGA TGCGCCTGGT TGTCGAGGGT GGCCGACTGG GTCCGGTTCC TTGA
 
Protein sequence
MAVSRGDGIR SMLRDVALFS ELPESLLAAV AVDARERRLL RGEVLFRAGE LCSAFYCVLS 
GQVKLTVAGG GGGEKVLEIV APGETFAEAL MFGHRPYPVT AVALSATRLL VVGSRTVHDL
IAQDPDFARL MLVGMSVRLH RLVRQIASVS LSSAAERVAD LLLSLAGPEA GESVVVELPA
GKAVLASRLN LSPEHFSRTL RDLADTGLIR VEGRRVAVLD VARMRLVVEG GRLGPVP