Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4589 |
Symbol | |
ID | 5705178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5208561 |
End bp | 5209274 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641273997 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001539344 |
Protein GI | 159040091 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0285855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACTA CATCCGAGAA CGCACCCGTC GCGCTGGTCA CCGGCGCCAA CAAGGGCATC GGCCTCGAGA CGGTCCGGCG CCTGGTCGAG GCCGGGTACC GCGTCTATCT GGGCGCCCGC AGCAAGGAAC GGGGACAAGC CGCCGCCGAA GCCGTCGGCG CACACTTCCT CGAGCTCGAC GTGACCTGCG ACGCATCGGT CCGTCCCGCC GTGGCCTTTG TCGAGCAGGC TGACGGGCAC CTCGACGTGC TGGTCAACAA TGCCGGTATC ACCGGTCCGG TGCGTGACCC TCACGACTAC ACCGCGGACG ACATCACCGA AGTGCTGCTG ACCAACGTCG TTGGCTACGT TCGCCTCATC CATGCCTTCC TGCCGCTGCT CGAGAAGAGC GACGCCCCGC GGATCGTGAA CGTAGGCAGC GGTCTGGGAT CGTTCGGACT CTTCCACGAC ATGGGCCGCA TCGAAGCGCA GGCGGGCACG CCGCCCTACG CGGCGTCAAA GGCAGCAATC AACATGCTGA CCGCTCGCCT GGCCCGGCTC CTGCCCCACA TCCGCATCAA CGTCGCGGAC CCCGGCATGA CCGCAACCGA TCTCAGCGGC GGCGAGGGCC ACTCGGTCCA CGACGGCACC GACGCCATCC TCGCCTTCGC TCTTGGCGCA CCTTGCGGCC CCAGCGGCAC CTTCGCCGAT CGCGACGGCG CACTGCCCTG GTAA
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Protein sequence | MGTTSENAPV ALVTGANKGI GLETVRRLVE AGYRVYLGAR SKERGQAAAE AVGAHFLELD VTCDASVRPA VAFVEQADGH LDVLVNNAGI TGPVRDPHDY TADDITEVLL TNVVGYVRLI HAFLPLLEKS DAPRIVNVGS GLGSFGLFHD MGRIEAQAGT PPYAASKAAI NMLTARLARL LPHIRINVAD PGMTATDLSG GEGHSVHDGT DAILAFALGA PCGPSGTFAD RDGALPW
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