Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4561 |
Symbol | |
ID | 5705419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5157756 |
End bp | 5158550 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641273973 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_001539320 |
Protein GI | 159040067 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0463237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCA CAGAGGAACA GCTCGCGAGC TACCACAACG ACGGGTACGT GCTGCTGGAC GACGTGTTCT CCGGCGATGA GATCGAGATC CTGTGCATCG CATTGAGCGA GGACCAGCGG GTGCCGGGTC CGCATCTGAT CACTGAGAAC GATGGATCCA CCCTGCGCTC GATCTACGCC TCGCACACCC GTCACCCAGT CTTCGAACGG CTTGTGCGCA CCGAGCGGCT GCTCGGCCCG GCCCGGCAGC TCGCCGGGGA GGATCTGTAC GTCCACCAGA TGAAGATCAA CTCGAAGCAG GCGTTCGGCG GCGAGCGATG GGCGTGGCAC CAAGACCACA TCGTCTGGCG GGACGTCGAC AACATGCCGG CCCCCTCCCA AGTGAACGTG GCGCTCTTCC TCGACGACGT CACCGAGTTC AACGGCCCCG TGATCTTCCT GCGTGGCTCG CACCAGCTGG GACCGCTGGA ACGCCCAGGG TCCACCGAGG GCCACGAATC CGGCCACATC GACCCGGACG AGTACTCGCT GACCCCGGCC GAGCTGGCCG ACCTGGTCAA GCAGCACGAG ATGGTCAGCC CGAAGGGCGC GCGCGGCGGG GTGCTGCTGT TCAGCTCGCA GATCGTCCAC GGGTCCGGCA CCAACATCTC GCCGTTCGCC CGCCGCCTGC TGATCCTCAC TTACAACCCG GTGTCGGACG CGCCGCGCCC GGTCGGCGCC CCGCGCGCGG AGCACCTGGC CGGCCGCGAC ACCTCCCCGC TCGTGGTCGA CAGCGGTCCA CTCGACCGCC GCTGA
|
Protein sequence | MKLTEEQLAS YHNDGYVLLD DVFSGDEIEI LCIALSEDQR VPGPHLITEN DGSTLRSIYA SHTRHPVFER LVRTERLLGP ARQLAGEDLY VHQMKINSKQ AFGGERWAWH QDHIVWRDVD NMPAPSQVNV ALFLDDVTEF NGPVIFLRGS HQLGPLERPG STEGHESGHI DPDEYSLTPA ELADLVKQHE MVSPKGARGG VLLFSSQIVH GSGTNISPFA RRLLILTYNP VSDAPRPVGA PRAEHLAGRD TSPLVVDSGP LDRR
|
| |