Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4559 |
Symbol | |
ID | 5705417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5153724 |
End bp | 5156357 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641273971 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001539318 |
Protein GI | 159040065 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0332938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATTTG ATCTTTTTGA TGAACTGCCT CATCCTCTTC TCGAAAGAGA TGTGGAGACC CAGTGGATCG AGCGGAAATT GCGGCGGCTT CGCGGTGGCC ATGGTGGTGT ACTGGCCATT GAGGGATCCG CCGGAACGGG CCGGTCCAGT CTCCTGAAAC TGCTCTATCA ACGAGCGGCC GAGGCAGGAT TCTGTGTGTT GTACGCCCGG GGGAACGAGT TCGAGGGCGA CGTGCCGTTC GGAGCCGTCG CCCAGCTGCT GGAACCGGTC CTCCCCGCTC GGATGGTGGA GGAGTCACCG AGCGTGGCCT CGCCGGCCCT GCTCGGCCGG CTGCGCAGCG ACCTGCTGGA GTGCGCGGGC GACCGCCGCC TGGTCCTCGT GGTGGACGAC GCCCGCTGGG TGGATGTGCC GTCGCTGCGG TTCCTGAGCT ATCTGGGTGC TCGCGCCGAA CGCACCCCGG TGCTGCTCGC TGTCGCCCTC GACCCGGCCG ATCGGGGCTC GGCGGCCGAC TGGCTGGGCA GCGTGAGCAC TTCGCTGGAG ACGACGCTGC TGCGGCTCGC CCCGCTCAGC GAAGTGGCCA CCCGCCGCCT GGTGTCCGTG ATGCTCGGGA CGGCGAGCTC GCCGGAGTTC GCCGCAGCCT GCTTCGACGC CACCGGGGGC AACCCGTTGC TGCTGCACGA GGTGCTGGCG GAGGCCGCCG CTGGCCGCTC AGGATCGCCC GAGGAGGCGC TGTCCGGACT GTCCCGGCGA CCCCCGGTCC GGGTGATGCG CCAGATGGTG CGGCGCTTGC AGAGTCTCCC GCGTTCCTCG GTCGCCGTCG CCCGCGCCGT CGCGGTGCTG GGCGTGGCCG AGGACCCGGT GGTCGTGTCG CGAACCGCGG ACTGCCCCGA GGCGGAGGTC GACGACGCGG TGACGGTGCT GGTCGACGCC GAGGTGATGA CCGACGGCCC GGCCCTGCGA TTTGCGCAAC CCATGCTGCG TACCGCCGTG TATGCCGGGA TCCCGGCCTT CCTGCGCGGC CGCCTGCACG CCCGTGCGGC GCGCGCGCTG GCCGAGACCG GCGCTCCTTC CGAGGCGGTC GCCGAGCAGC TGGTCAACGT TCCACCCGCC ATGGTTCCCG CGGCGGGCGC CAAGGAGCTG GCCGAGCCGC GGTCGAGGAA CCGGCGAGCC TCCCGGCACC TGCGCCCGGT CTGGGGCGAG AACCCGGTGG AGCGCGCGGC GGCGGCGCTG GAGGCCGCCC GGACGCTCAC CCTCGACTGC CAGTTCGACC GGGCGATCGC GATCCTGGAA GCAGCGATCG CCGACGTGCG CGATCCGGCC CTCAGCCCGC GGCTGGAGGC GACGGCGGTG TGGATCGCGC AGCTTTCCCC GAGCACCCGG GGCCGGGGAC GGGCGCGGCT GGATACGCTC GAACGGCCGC ACCTCGCGGA GAAGGCGCTG CTGGACCAGA TCTGGCGGGG AACGCCGGCC GAACACATCG GACGGCTCAC CGGCGATCTG CTGCACCGGC CCCGGATCCC GGCCGGCGAC AGCACCGGAT GGAGTGCCGG CCTGGTGGCG GCCGTGACGC TCGCGCACTT CGACCGGCTC GCCGAAACTC GGCAGGCAGT ACTGACTCTG CGTGATGCGG CGAGCCAGAC CCACACCACG CTCGCCGGGC TCGACCTGTG CCTGCGGGCC GCGGTGGACT ACCAGCTGGG GGACATCGCC GGGGCCGGAG ACCTCGCCCT GCAGGTGCTC TCCGGCACCG ACGGGCAGCG CCCGGCCCGC ATGGTGCAGG CGTTCGCCGG TGCGGTTCGT GCCGAGACCC TGATCGCGCA GGGCGCGTTG GATGCGGCTG CCGCGATGGT CGAGGAACCG GGCCTGATCG ACGACTGCGG GTCGGACACT ATCGCCGTCC TTCCGCTGCT GCGCGCCCGC GGCCATCTGC GGATCGCCCA GGACCGGCTC GAGGAGGGCC TCACCGATCT GCTCCGGGGC CGCCGGGCCG CTGCCAGCCT GGGACTGACC CCGGGGGCGT GGGTCGGCTG GTCGTCAGCG GTCACCGCGC TGCACCGGCT CGGGCGTACT GAGGAAGCGC TGTTCATGGC ACGGGAGGAG CTGGCCGGAG CCCGGTCCTG CGGCGCGCCC GCGCCGCTCG CCGCCGCGCT GCGCACCCTG GGGCTGCTCA CCCCGGGACC GGCGGCTCTG CCCCTGGTGG AGGAGGCGGC CGGTCTGATG GAGGACTTCC CGGGGCAGCT GGAGAAGGCC AGGACCCAGC TGACGTACGG GATCATGCTG CACCGCGTCG GCAAGAGGGC GGCGGCGCGG GAGCAGCTGC GGATGGCTGC CGGGACAAGC GGCGTCCACG GGGCGCACGT GCTGAACCGC CGCGCCATCG ATGAGCTGCG CTCGATCGAG GGCGATACCA CGGACCGTCG ATCCCGGACG GTGCTGACTC CCCAGCAGCA GCGGGTGGCC GAACTCGCCG CCGAGGGCAT GCAGAACGAA GAGATCGCGC AGAAGCTGTT CGTCACGGTG AAAACCGTCG AGTGGCACCT GACGCAGGCG TACCGCAAGC TCGGCATCGA GTCTCGCACT GCGCTTTCGC CCGCGCTCGC CGCGACAACC CTGGACTACG CAAAGTCAGC GTGA
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Protein sequence | MVFDLFDELP HPLLERDVET QWIERKLRRL RGGHGGVLAI EGSAGTGRSS LLKLLYQRAA EAGFCVLYAR GNEFEGDVPF GAVAQLLEPV LPARMVEESP SVASPALLGR LRSDLLECAG DRRLVLVVDD ARWVDVPSLR FLSYLGARAE RTPVLLAVAL DPADRGSAAD WLGSVSTSLE TTLLRLAPLS EVATRRLVSV MLGTASSPEF AAACFDATGG NPLLLHEVLA EAAAGRSGSP EEALSGLSRR PPVRVMRQMV RRLQSLPRSS VAVARAVAVL GVAEDPVVVS RTADCPEAEV DDAVTVLVDA EVMTDGPALR FAQPMLRTAV YAGIPAFLRG RLHARAARAL AETGAPSEAV AEQLVNVPPA MVPAAGAKEL AEPRSRNRRA SRHLRPVWGE NPVERAAAAL EAARTLTLDC QFDRAIAILE AAIADVRDPA LSPRLEATAV WIAQLSPSTR GRGRARLDTL ERPHLAEKAL LDQIWRGTPA EHIGRLTGDL LHRPRIPAGD STGWSAGLVA AVTLAHFDRL AETRQAVLTL RDAASQTHTT LAGLDLCLRA AVDYQLGDIA GAGDLALQVL SGTDGQRPAR MVQAFAGAVR AETLIAQGAL DAAAAMVEEP GLIDDCGSDT IAVLPLLRAR GHLRIAQDRL EEGLTDLLRG RRAAASLGLT PGAWVGWSSA VTALHRLGRT EEALFMAREE LAGARSCGAP APLAAALRTL GLLTPGPAAL PLVEEAAGLM EDFPGQLEKA RTQLTYGIML HRVGKRAAAR EQLRMAAGTS GVHGAHVLNR RAIDELRSIE GDTTDRRSRT VLTPQQQRVA ELAAEGMQNE EIAQKLFVTV KTVEWHLTQA YRKLGIESRT ALSPALAATT LDYAKSA
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