Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4397 |
Symbol | |
ID | 5703445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4968237 |
End bp | 4969601 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641273815 |
Product | hypothetical protein |
Protein accession | YP_001539165 |
Protein GI | 159039912 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.792915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0309659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC AGCGCCACGA CCACGAACCG GACCGACCAG GTGCGCGCCG GGCGAGGTCA CGATGGTGGA ACGTCGGACT GGCCGGCATG ACCGGCCTGG CCCTGACCAC CAGCCTCGGC ATCGGCGGAG CGCCGGCTAC CGGCACCGTC GACCGCACTC TCACCGCCAC CGATGACCGG CCGGGAAAAC CCGACCATGC CTCCACCGAC AACAAAGATC ACGAGGGCAA GGGAAAGAAG GGCACACGCA AGGGCACACC GGTCCCGTGT AGCGCCGACG CGTTGATCGC CGCGATCACT TTGGGCAACG CCCGCGGTGG CGCCGTGCTC GACCTTGCCA GTAAGTGCAC CTATCTGCTT ACCGCCGACA TCGACGACGG CGCCGGCCTT CCTGAGATCA CCGCCCCGAT CACCCTCAAC GGTGGCACAC ACACCAGCAT CACACGCGCC GCCGCAGCGC CCCTGTTCAG AATTCTCACC GTTGAGGCCG GCGGAGACCT CACCCTCAAC CACCTCACCA TCACCGGCGG ACAGACCACC GACAACGGCG GAGGAATCCT TGTCAACACC GGCGGAACAC TGGCCACCAA GCACAGCACC ATCATCCGCA ACATTGCCGG AGGCTCAGGT GGCGGCATTT TGAGTTTCGG GAACACATCC ATCGACTCAT CCACTATATC CTATAATTCT GCGATTATAG ACGGTGGCGG TATCAACAGT CAACGGCAAA TATATTTGAC AAATTCTTTC ATTGTCAATA ATCAGACTTC TATCAACAGC GGCGGCGGTG CCGCGATTGT GGGATCCGCG GCCATCGCGA AGACCGCGAT CACGGGCAAC GGCGCCGGGA ATGCCGGCGG CGGTCTCGTC ATTTTTGCAG CAGCGGCTGC GATTACTGAT TCCAAAATCG TCGACAATGC CAGCGCTAAC AATGGTGGGG GAATTTCCGT TCCTGATGGC GCTCAGCTTA CGTTGCGGCG GGTAGCCGTC GCGGACAATC GGGCCGGCGG CACCGGCGGC GGGCTTTTCG TAAACCTCAA CAATCAGGTC GTGGTCGAAG ACGCCAGGTT CGAGAGGAAC ACCGCAACAG GAGACGGTGG CGGAATCAGC AACCTCAGCG ATACGGTGGT GCGGCAGTCC AAACTCTCCG ATAACCAGGC CGACGAGGGC GCCGGCGTAT TCAACGGTGC CACCGCTACG CTTACCCTCT ACTCCACTAA AGTCGTCAAG AATACGGCCG TCACTGACGG CGGTGGGATC TTCAACGAGG CGGGCGGCAC GGTCGAGTTG AACACCGCCA CCGGCACCAC CGTGGCAAAG AACCGGCCGA ACAACTGCGT CAACGTCACC GGCTGCCCAG ACTGA
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Protein sequence | MNDQRHDHEP DRPGARRARS RWWNVGLAGM TGLALTTSLG IGGAPATGTV DRTLTATDDR PGKPDHASTD NKDHEGKGKK GTRKGTPVPC SADALIAAIT LGNARGGAVL DLASKCTYLL TADIDDGAGL PEITAPITLN GGTHTSITRA AAAPLFRILT VEAGGDLTLN HLTITGGQTT DNGGGILVNT GGTLATKHST IIRNIAGGSG GGILSFGNTS IDSSTISYNS AIIDGGGINS QRQIYLTNSF IVNNQTSINS GGGAAIVGSA AIAKTAITGN GAGNAGGGLV IFAAAAAITD SKIVDNASAN NGGGISVPDG AQLTLRRVAV ADNRAGGTGG GLFVNLNNQV VVEDARFERN TATGDGGGIS NLSDTVVRQS KLSDNQADEG AGVFNGATAT LTLYSTKVVK NTAVTDGGGI FNEAGGTVEL NTATGTTVAK NRPNNCVNVT GCPD
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