| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4335 |
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| Symbol | |
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| ID | 5706611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4899776 |
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| End bp | 4902304 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641273757 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_001539107 |
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| Protein GI | 159039854 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACA GTCCACCTTC GGTGCGTAGG CCAGTCGAGC AGGTCTGGCT GATCACCGCC
CCACTGGCGA TGGTCGCGGT GCTCTGTAGC ACCTTCCTGC TGCTCGCGGC CGAGTCGCCG
CCGGGCAACC TCGCCATCGC CGCTGTCCTG TTCGTCATGA TGGTCGTGGC TGGCACCGTT
GTCCTGCAGA TCGTCGTGCG CCGTCAGGCG CTCGAGGTGA TCGCCACCGA GATCCCACTC
GTGCTGGCCT TCTATTACCT GCCGCCGTTG ACGGTTGTGG CGCTCATGGT GCTGTCCGCC
CTCGTCGCGC AGCACTGGCG TCGACTCGGC GCGGTCAAGG TCGGATTCAA CGTGGCCCGT
ACCGGCGCGG CGGCCTCGCT CGGAGGCGTC GTCTTGGTCG GGCTCTCCGG CGTCGACGGA
GCCGGCCCCC GGACGTGGGC GGTCCTGTTC GCCGTGGTCA CCGTGAACTC GGTGGTCTCC
CTGATCGCGA TCAGCGGCGT CGTGAGCCTG CTACACGGCT GGCAGACCGG CTGGGAGCTG
GTCCGCAGGT CCCCGGTTCC GTTGATGGTG AACTTCATCA ACGTGGTGAT CGGCCTGATC
CTGCTCCTGG CGTTGGAATC GACCTGGTGG TCGATGCTGT TGATCGCCGT GCTGGCCGTC
GCGATGGTGG TGATATACCG CTCGTACGCA CAGTTCCTCC GGCAGCATCG CACGTTGAGC
AGCATGTACG AGCTGACCCA GGCGATGACC GAGGGCGGTC GGGAGGGCGG CATCGCCGAC
GTTCTGTTGG GCCGGATCCG GGCGCTGATG CAGGCCGAGT ACGCGACGCT GTGGCTCCCC
GCGCGGGGGC GCTATCCCGA GTTGTTGCTC AGTGCCCGGG TGGACGACCG GGGCCTGCTC
GACGTCGCGC CGACGCCCGC TGACCTGCGT GAGCAGGTCC GGGAGTCCGG TGAGACACTC
GCCGCCGGCC GGGGCCTTCC GAAATCTCCC GACATCTCAC GGGACTTGGC TGGGCATGGG
CTGAAGGACG TGATCGTCGT CCCGTTACGG TCGGGTCAGG CGGTGATCGG CACGCTGGAG
GTCGTCAACC GGCTCAGCGC CGGGGGCCAC TTCACGCCGG ACGACATCCA AGTCTTCGAG
ACCGTCGCCG CGCACACCGC GGTCGCACTC GAGAATTCCC GGCTGGTCGA CCGGCTGCGA
CACGACGCCG ACCACGACAC GCTCACCAAG CTGCCCAACC GGCGGCAGGT CACCGCGGCG
CTCGACGAGG CGGTGAAGAT CCGGGCGCCG GGCGAGGTGG TGGCACTCCT GCTGTTCGAT
GTGGACCGAC TCCGGGAGGT CAACGAGTCC CTTGGGCACG CCGCTGGGGA CAAGGTCCTG
GTCGAGGTCG CCGAGCGGCT TCGCTCGTGT GCGCCGTCGT CCGCGCTGGT GGGGCGGGTC
GGTGGCGACG AGTTCCTCGT GACCCTTCGG CTGGAGGGGG CGACTGAGGC CCTGGACCTG
GCGGCAGGTC TGCGGGAGCA GATCCGGGCC GTGGTGACCT TCGACGGGCT CACCCTGGAC
GTGGATACAG CAGTGGGCGT CGCCGTCCAC CCGGACCATG GCAGTGGGGC CGCCGTGTTG
CTGCAACGGG TTGATCTGGC CGTGACGGCA GCCAAGTCCG CGTCCGGGAG TGTCCGGCTG
TTCAACCCCG CGCTGGAGTC CCGGTCGCTG CGGCGACTCG GTCTGGCCGG TGATCTGCGG
CGGGCCCTGG ACAACGGTGA ACTGGAGGTG TATTTCCAGC CGAAGGTCAC CCTGCGGGAC
CGGAGATTGG TGGGCGTCGA GTGCCTTGCC CGCTGGGAGG ACCGTGCCCT TGGGCCGGTC
GCACCGGAGG ACTTCGTGGC GGTCGCGGAG CACACCGGCC AACTGGGGCG GCTCACCGAG
TTCGTCCTCC GGGAGGGGCT GCGGCGCAGC CGTGACTGGG CGCATGGCGG TCACCCGCTC
TCCGTCGCGG TCAACCTCTC CCCGCGTACG CTGACCGACC AGCACTTCCC GGCCCAGGTG
CGGGAACTGC TCGAGGAGTA CGGGGTGCCG CCGCAGCGGC TCACGTTGGA AATCCGGGAG
TCCGGGGTGC TGGACGGCAC CGATCGCCCT ATTCCCATCC TCTGTCGCCT GCGTGATCTG
GGGGTCCGCC TGTCGGTGGA CGACTTCGGA ACCGGTGACT CGTCGCTCGC GCACCTGCGA
AGACTCCCCG TCCACGAGGT GAAGGTCGAC CATCGGTTCG TGCAGGGGAT GGCCACCGAT
CCGGGAGACC TGGCGATCGT CAACGCCGTG GTGACGCTCT CCCAGCAGTT CGGCCTCGCT
GTTGTGGCAG AGGGTGTGGA GAGCGAGTTG ACCCTGGAAC TCCTCCAGGA CATCGGGTGT
GAGATCGGGC AGGGTTTCCT GTTCAGTCGG CCGTTGCCCT ACGAGCGGCT GGAGGCGTGG
TTCGGCGCCC AGGTGGAGCC GGAGGCCGTG CCCGCGGGGG AGTTGCCACG CCTCCGAGTT
GTCCCCTGA
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| Protein sequence | MPDSPPSVRR PVEQVWLITA PLAMVAVLCS TFLLLAAESP PGNLAIAAVL FVMMVVAGTV
VLQIVVRRQA LEVIATEIPL VLAFYYLPPL TVVALMVLSA LVAQHWRRLG AVKVGFNVAR
TGAAASLGGV VLVGLSGVDG AGPRTWAVLF AVVTVNSVVS LIAISGVVSL LHGWQTGWEL
VRRSPVPLMV NFINVVIGLI LLLALESTWW SMLLIAVLAV AMVVIYRSYA QFLRQHRTLS
SMYELTQAMT EGGREGGIAD VLLGRIRALM QAEYATLWLP ARGRYPELLL SARVDDRGLL
DVAPTPADLR EQVRESGETL AAGRGLPKSP DISRDLAGHG LKDVIVVPLR SGQAVIGTLE
VVNRLSAGGH FTPDDIQVFE TVAAHTAVAL ENSRLVDRLR HDADHDTLTK LPNRRQVTAA
LDEAVKIRAP GEVVALLLFD VDRLREVNES LGHAAGDKVL VEVAERLRSC APSSALVGRV
GGDEFLVTLR LEGATEALDL AAGLREQIRA VVTFDGLTLD VDTAVGVAVH PDHGSGAAVL
LQRVDLAVTA AKSASGSVRL FNPALESRSL RRLGLAGDLR RALDNGELEV YFQPKVTLRD
RRLVGVECLA RWEDRALGPV APEDFVAVAE HTGQLGRLTE FVLREGLRRS RDWAHGGHPL
SVAVNLSPRT LTDQHFPAQV RELLEEYGVP PQRLTLEIRE SGVLDGTDRP IPILCRLRDL
GVRLSVDDFG TGDSSLAHLR RLPVHEVKVD HRFVQGMATD PGDLAIVNAV VTLSQQFGLA
VVAEGVESEL TLELLQDIGC EIGQGFLFSR PLPYERLEAW FGAQVEPEAV PAGELPRLRV
VP
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