| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4301 |
|---|
| Symbol | rpsH |
|---|
| ID | 5705095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4871635 |
|---|
| End bp | 4872042 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641273720 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001539073 |
|---|
| Protein GI | 159039820 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.660154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00325802 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGA CCGACCCGAT CGCAGACATG CTCACGCGTC TGCGTAACGC CAACCAGGCG
TACCACGACC GGGTGACGAT GCCCTACTCG AAGATCAAGG CCAATATCGC CGAGGTGCTC
AAGGCTGAGG GCTACATCAG CACCTGGTTG GTCGAGGAGC CCGAGGAGAG TGTCGTCGGC
AAGCGACTGG TCGTCGAGCT GAAGTACGGC CAGAACCGCG AGCGGAGCCT GGCCGGCATC
AAGCGTGTGT CCAAGCCCGG CCTCCGGGTG TACGCCAAGT CGGGCGAGCT TCCCCGGGTG
CTCGGTGGGC TTGGCGTGGC GATCATTTCG ACGTCCCAGG GGCTGCTGAC CGACCGGCAG
GCCCGCAAGC GGAGCGTTGG CGGGGAAGTC CTCGCCTTCG TCTGGTAA
|
|---|
| Protein sequence | MTMTDPIADM LTRLRNANQA YHDRVTMPYS KIKANIAEVL KAEGYISTWL VEEPEESVVG
KRLVVELKYG QNRERSLAGI KRVSKPGLRV YAKSGELPRV LGGLGVAIIS TSQGLLTDRQ
ARKRSVGGEV LAFVW
|
|---|
| |