Gene Sare_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4270 
Symbol 
ID5705775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4846563 
End bp4847336 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID641273689 
ProductABC transporter related 
Protein accessionYP_001539042 
Protein GI159039789 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.74821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC TGTCCGGGGT ATCTCGGAGC TTCGATGGCC GCTCCGGCCG GGTCGAGGCC 
CTGCGTGACA TCAACCTCGA CATCGCCGAC GGCGAGTTCG TGGCCGTACT CGGCCGTTCC
GGGTGCGGCA AGTCCACTTT GCTCCGGCTC GTCGCCGGGC TGCTCCCGGT CACCGCCGGA
GCGGTGACGG TCGCTGACAC ACCAGTCGCC CGTCCCCGGC AGGACGTCGC GATGCTCTTC
CAGCGGCCCG CACTGCTGCC CTGGCGAACA GTGCTCGACA ACGTCCTCCT CCCCGTGGAG
ATCTTCGGCT GGAAGCGGGC CCAACACCGC GACCGCGCCC GACAACTACT GGAACTGGCC
GGCCTCACCG GGTTCGAGAA GCGGCTGCCC CACGAACTCT CCGGTGGCAT GCAACAGCGA
GTCTCGCTGT GCCGCTCACT GATCAGCCAG CCCCGGGTGA TGCTGATGGA CGAACCGTTC
TCCGCACTCG ACGCGCTCAC CCGCGAGGAG CTCTCCGGTG AGCTGCAACG GATACACATG
GAAACGTCGG CAACCGTCGT CTTCGTCACC CACTCGATCG AGGAGGCCGT CCTGCTGGCC
GACCGCGTGG TGGTGCTCAG CCCTCGCCCC GGCCGGATCC GCGACATCGT TGACGTGGCC
ATTCCCCGAC CGCGCACCCT CGGCCGCAAC GCCCATCTGG CCGACGTCGC CCGGGTCAGC
GCCGACCTGC ACGAGCTGCT CGCGGAGCGT GACACAGCGG TAGAGGTGCA CTGA
 
Protein sequence
MIRLSGVSRS FDGRSGRVEA LRDINLDIAD GEFVAVLGRS GCGKSTLLRL VAGLLPVTAG 
AVTVADTPVA RPRQDVAMLF QRPALLPWRT VLDNVLLPVE IFGWKRAQHR DRARQLLELA
GLTGFEKRLP HELSGGMQQR VSLCRSLISQ PRVMLMDEPF SALDALTREE LSGELQRIHM
ETSATVVFVT HSIEEAVLLA DRVVVLSPRP GRIRDIVDVA IPRPRTLGRN AHLADVARVS
ADLHELLAER DTAVEVH