| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4130 |
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| Symbol | |
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| ID | 5708110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4689250 |
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| End bp | 4692738 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641273558 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001538911 |
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| Protein GI | 159039658 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG2887] RecB family exonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.88214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCAGC CGACCCTGTT CAGTGCGGCG ACCCCGACCC CCCGTACGGC CGACGCCGGA
CCCCGGTACA CCCCGGTCGA GTTGGCGAAG CTGCTGCGAC TGCCGGCACC CACCCGGGAA
CAGGCGGCGG TCATCGCCGC GCCGGTGGAG CCGTTGCTCG TCGTCGCGGG CGCCGGTTCC
GGCAAGACCG AGACGATGGC CGCGCGGGTG GTCTGGCTGG TGGCCAACTC GTACGTCCAC
CCGGAGCAGG TGCTCGGCCT GACGTTCACC CGCAAGGCCG CCGGAGAGCT GGCGCACCGC
GTCCGGGCCC GGCTCTCCCA GCTCGTCCGC CGGCTCGGCC GGCGCGGGCG CGACCCGCAG
GACGAGTCGT TGGCCGGGGA ACCGACGATC GCCACCTACC ACTCGTACGC TGGGCGGGTG
GTGACCGAGC ACGGGCTGCG TGCCGGGTAC GAGCCCGCCA CCCGGCTACT CACCGAGGCG
TCCCGCTGGC AGCTCGTGGA CCTGATCGTG CGCAACTACG ACGGTGACAT GTCCGAGGTG
GATCGGATGC CGAGCACCAT CACCGACGCG GTGCTGGCGC TCGCCGGCGA GCTGGACGAG
CACCTGGTCG AGCCGGACCA TCTGGCCGGC TGGACCGGGC GGTTCTTCGC CGACGTGCAG
TCCCGCCCCG GCCGGGTGTA CGCCGACGTT CGTCGGGCCC TCACGCTTCA ACAGATCCGG
TTGAAGTTGC TTCCGTTGGT CCGGGCATAC GCCCGGCGCA AGAGGGACTT CGAGGCGATG
GACTTCGCCG ATCAGTTGGC CCGGGCCGCC CGGGTCGCGC GGGATCACCC GGTGGTCGGC
GAGATCGAGC GGGACCGCTA CCGGGTGGTG TTGCTCGATG AGTACCAGGA CACCAGCCAT
GCCCAGGTGG TGCTGCTCAA CGCGCTCTTC GGTGGCGGGC ACCCGGTGAC CGCCGTCGGT
GACCCCTGCC AGTCGATCTA CGGCTGGCGC GGGGCGAGCG CGGGTACCCT CGACCGTTTT
CCCACCGAGT TCGCGCGGGC CGACGGCGTT CCAGCCCAGG TTCGTACGCT GACGACCAGT
TGGCGAAACC GGCCCGAGGT TCTTGGGGTG GCGAATGCCC TCGCCACCCC GCTACGTGCC
GCAGGTGCCC GGGTGCCGGA ACTGCACGCC GCGCTCAGCG TCAAGGAGCC GATCCCGCAC
CGTACCCCGC GAGGCAGCGC CGCCGGCACC GTCCACTGCG CGTTGTTGGA CACGTACGCG
GACGAGGCGG AGTGGATCGC CGACAGCCTG CTGCGTGCCT GGCAGGGCGC GGCGGGAGCG
CCCGGCGCGG TGCCCGAGCA CCTTCCGGTC GCGGCCCGCC CCACCACTGC GGTGCTGGTG
CGGCTACGCA GCCAGATCCC GGCCATCGAG TCGGCGCTGC GGGCCCGGGG CCTGCCGGTC
GACGTGGTGG GGCTCGGTGG CCTGCTGGAC ACGCCGGAGG TACGGGACGT GGTGTGTACC
CTGCGGGTGC TCGCCGACCC GACCGACGGG GCGGCACTGC TACGGCTGTT GACCGGCGCC
CGATGGCGGA TCGGGCCACG GGACCTGGTG GCCCTGCACC GCCGGGCGCG GGCCATCGCC
GCCGCCCGCC GGAAGCTCAC GGCCGGTGAC GAGCCGGAGA TCGTTCCGGA CGCGCTGGAC
GAGGCGACCC TGGTGGAGGC GCTGGCCGAC CTGGGCCCGG CGCCGGCGTA CTCGGCGGAG
GGTTATGCCC GGTTTCGCGC CGCCGCGCAG GAACTGGGCT TGTTGCGTTA TCGGCTGGAC
CAGTCGCTGC CAGACCTGAT CGCGGACGTC GAGCGGACGA TCGGCCTGGA TGTGGAGGTA
GCGGTTCGCG CCGGTCGGGA CGGGGCCGGT GATGCTGGGC TGGCCCGGGG GCACCTGGAT
GCGCTCGGCG ATGTCGCGGC CCGGTTCAGC GGGGAGACGC CGGGTGCCAC ACTGTCGGCC
TTCCTGGCCT ATCTCGCAGC GGCGGAGGAC GAGGAGCGAG GGCTCGCCCC CGGTGAGGTG
GAGGTGGTCG AGGGGGCGGT GCAGGTGCTC ACCGCGCACG CGGCCAAGGG CCTGGAGTGG
GATGTCGTGG CGGTGGCGGG GCTCAGTCGC GGGGTGTGGC CTGGTCCGGT GCGCAATTCG
GACCACTGGC TGGGCGGGCT GGGGGTACTG CCGTTCCCGC TCCGGGGCGA CGCCGACGGG
TTGCCCGTGT TGGAACTGGC CGAAGCGGGC GAACAGCGCG GGGTGGCGCA GGCTCTGGCG
GACTTCACCG CTGCGTGGCG GGCGCACGAT GAGCGGGAGG AGCGGCGTCT GGCCTATGTC
GCGGTGACTC GTCCCCGCCG ACTACTGCTC TGCTCCGGGT ACTGGTGGGG GGAGGGCACG
AAACGTGCGC GCGGCCCGTC CGCGTTGCTC CGCGACGTGC ACGGAGCCTG CCTGGACGCG
GGTGCCGGGC TCGTGGTTGA CGAATGGGCC GCGGAGCCCG CCCCGGACGC GGTGAATCCC
ACCACCGAGG TGGTGCTCCG GGCGGAGTGG CCGGCCGATC CGTTGGGGGA CCGTCGACCG
GCGCTCGCCG AGGCGGCCAC GCTGGTCCGG CGCTTCCTGA CCGACGGGGA TCCGACCACC
CGCGCGGCGA CCGGCGCCGT TGCGACCGCA GCTCCGGGTG ACGACGACGC GGAAGACGAC
GATCCGGAGG TGGTGCGCTG GCGGCGGGAG GCCGACCTGC TCCTCGCCGA ACGTGCCGAG
CTGACTCGGC ACGCCGGGCC GGTCGAGGTC GCGCTGCCCG CTGCGCTGTC GGTCACCCAA
CTGGTGGCGC TGCGGCGGGA TCCGGCGGCC CTGGCCAGGT CGCTGCGCCG GCCCTTGCCC
ACCGAGCCGA ACCCGTACGC CCGTCGGGGC ACCGCCTTCC ACGCCTGGCT GGAGCAGCGG
TTCGGGGCCG GGCGGTTGCT CGACGTGGAT GAGCTGCCCG GTGCCGCGGA CGCGGATGCC
GCGCCGGACG AGGCGCTGGC CGAACTCCAG GAGCGCTTCC TTCACAGCGA GTGGGCCGAC
CGGACGCCCG TCGAAGCCGA GGTGCCGTTC GCGACGGTGA TCGCCGGTGT CGTGGTCCGG
GGGCGGATGG ACGCGGTCTT CGGCCGGCCT GGCGGACGGT TCGACGTGGT GGACTGGAAG
ACTGGCCGAC AGCCCGCCGG ACCGGCCGCC GCTGCGGCGG CGGTGCAGCT CGCTGTGTAT
CGGCTGGCCT GGGCGGAGCT GGCGGGAGTG CCGGTCGAGC GGGTCGGGGC GGCGTTCCAC
TATGTCCGGG ACGGGGCGAC GGTGCGGCCG GTGGATCTGC TTGACGTGGC CGGCCTCACC
GCGCTGATCG AGTCGGTCCC GGAGCGTCCT GCCGCCCCTG ACCCGGCCGT CCGGGCCAGC
ACTGACCGAG TCGGCAATGA GCGGCGGTCG GGTCCGAATG GTGACTGTGT CCGGCCGCGC
GGCCGGTGA
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| Protein sequence | MTQPTLFSAA TPTPRTADAG PRYTPVELAK LLRLPAPTRE QAAVIAAPVE PLLVVAGAGS
GKTETMAARV VWLVANSYVH PEQVLGLTFT RKAAGELAHR VRARLSQLVR RLGRRGRDPQ
DESLAGEPTI ATYHSYAGRV VTEHGLRAGY EPATRLLTEA SRWQLVDLIV RNYDGDMSEV
DRMPSTITDA VLALAGELDE HLVEPDHLAG WTGRFFADVQ SRPGRVYADV RRALTLQQIR
LKLLPLVRAY ARRKRDFEAM DFADQLARAA RVARDHPVVG EIERDRYRVV LLDEYQDTSH
AQVVLLNALF GGGHPVTAVG DPCQSIYGWR GASAGTLDRF PTEFARADGV PAQVRTLTTS
WRNRPEVLGV ANALATPLRA AGARVPELHA ALSVKEPIPH RTPRGSAAGT VHCALLDTYA
DEAEWIADSL LRAWQGAAGA PGAVPEHLPV AARPTTAVLV RLRSQIPAIE SALRARGLPV
DVVGLGGLLD TPEVRDVVCT LRVLADPTDG AALLRLLTGA RWRIGPRDLV ALHRRARAIA
AARRKLTAGD EPEIVPDALD EATLVEALAD LGPAPAYSAE GYARFRAAAQ ELGLLRYRLD
QSLPDLIADV ERTIGLDVEV AVRAGRDGAG DAGLARGHLD ALGDVAARFS GETPGATLSA
FLAYLAAAED EERGLAPGEV EVVEGAVQVL TAHAAKGLEW DVVAVAGLSR GVWPGPVRNS
DHWLGGLGVL PFPLRGDADG LPVLELAEAG EQRGVAQALA DFTAAWRAHD EREERRLAYV
AVTRPRRLLL CSGYWWGEGT KRARGPSALL RDVHGACLDA GAGLVVDEWA AEPAPDAVNP
TTEVVLRAEW PADPLGDRRP ALAEAATLVR RFLTDGDPTT RAATGAVATA APGDDDAEDD
DPEVVRWRRE ADLLLAERAE LTRHAGPVEV ALPAALSVTQ LVALRRDPAA LARSLRRPLP
TEPNPYARRG TAFHAWLEQR FGAGRLLDVD ELPGAADADA APDEALAELQ ERFLHSEWAD
RTPVEAEVPF ATVIAGVVVR GRMDAVFGRP GGRFDVVDWK TGRQPAGPAA AAAAVQLAVY
RLAWAELAGV PVERVGAAFH YVRDGATVRP VDLLDVAGLT ALIESVPERP AAPDPAVRAS
TDRVGNERRS GPNGDCVRPR GR
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