| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4070 |
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| Symbol | kgd |
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| ID | 5705365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4627788 |
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| End bp | 4631501 |
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| Gene Length | 3714 bp |
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| Protein Length | 1237 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641273496 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_001538851 |
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| Protein GI | 159039598 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.102403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGACCC AGCAGACCTC GCAGGAGAAC CCACTGGCGG GTTTCGGCCC GAACGAGTGG
ATCGTCGAGG AGATGTACCA GCGCTACCTC ACCGATCCCA CCAGCGTCGA CCCGGCCTGG
CACGACTTCT TCGCCGACTA CCGGCCCGCT CCGGGCGCGG GTGGAACGCG CGGCGAGCAG
CCCGCCGCAC CGGAGGGCGA CGGCCGACCT GAACCTTCCG CCGCCCAGCC CGCTCCGGCA
CCGGAGGGCA AGCCCACGCC GACCAAGCCC GCCCCTGCGA AGCCAGCCGC CGCGAAAGCA
GCTCCCGCGA AGCCGGCTCC CGCGAAGCCG GCGGCCAAGG AGTCCGCGCC GACCCCGTCC
GCCCCGCGAA CCGCACCGCT GCGTGGGGTC GCCGCGAGGA TCGTCCAGAA CATGGACGCG
TCGCTGAGCG TGCCGACCGC GACCAGTGTG CGTGCCGTCC CGGCCAAGCT GCTGGTGGAC
AACCGCATCG TGATCAACAA CCATCTCGCC CGCGGACGCG GCGGGAAGGT CAGCTTCACC
CACCTGGTCG GGTACGCGCT GGTCCGTGCG CTGGCTGTGC ACCCGGAGAT GAACAACTCC
TACTCCGTCG TGGACGGCAA GCCGGCGCTG GTCCGCCCCG AGCACGTCAA CCTCGGAATC
GCGATCGACC TGGTCAAGCC GGATGGCAGC CGCAACCTGG TGGTGCCCTC CATCAAGGCG
TGCGAGCAAC TGGACTTCCG GCAGTTCTGG CAGGCGTACG AGGACGTGGT CCGGCGGGCC
CGGAAGAACG AGCTGACCAT GGAGGACCAC GGCGGCACCA CGATCTCGCT GACCAACCCG
GGCGGCATCG GCACGGTGCA CTCGATGCCG CGGCTGATGA CTGGCCAGAG CGCGATCATC
GGCGTCGGCG CGATGGAGTA CCCGGCGCCC TACCAGGGCA TGAGCGAAGC AACACTTGCC
GAGCTGGCGG TCAGCAAGGT CATCACGCTG ACCAGCACCT ACGATCATCG GATCATTCAG
GGCGCCCAGT CCGGGGAGTT CCTGAAGGTG ATGCATGAGC TGCTGCTCGG CGAGCATGGC
TTCTACGACC AGATCTTTAC CTCGCTCCGC ATTCCCTACG AGCCGGTGCG CTGGATGCGC
GACGTCGCGA TCGACGGCGA AGGCCAGATC AACAAGACCG CGCGGGTGCA CGAGCTGATC
CACGCGTACC GGGTGCGCGG CCACCTGATG GCCGACACCG ACCCGCTGGA ATTCAAGATC
CGCAAGCACC CGGACCTGGA CGTCCTCCAG CACGGGCTGA CCCTGTGGGA CCTGGACCGT
CAGTTCCCGG TCAACGGTTT CGCCGGGCGG CAGCGGATGA AGCTGCGCGA TGTCCTCGGG
GTGCTACGCG ACACGTACTG CCGTCGGGTC GGCATCGAGT ACATGCACAT CCAGGATCCG
GAGGAACGGC GCTGGATCCA ACAGCGGGTC GAGCGCAAGT ACGAGAAGCC TGCCGTCGAC
GAGCAGAAGC ACGTACTCAA CCGGCTCAAC GCCGCGGAGG CATTCGAGAC CTTCCTACAG
ACCAAGTACG TCGGCCAGAA GCGGTTCTCC CTGGAGGGGG GCGAGTCGCT GATCCCGCTG
CTCGGCGAGG TGTTGGAGGC ATCCGCCGAG GGTGGACTGG ACGAGGTCGT CATCGGTATG
GCGCACCGGG GTCGACTCAA CGTGCTGGCC AACATCGTCG GCAAGCCGTA CGAGAAAATC
TTCTCCGAGT TCGAGGGGCA TCTGGACCCG CGGTCCACGC AGGGATCTGG CGACGTCAAG
TACCACCTCG GGCAGAACGG CAAGTTCACC ACCCCGAACG GCGAGCACTC GGTCAAGGTC
TCGGTGGTGG CGAACCCGTC ACACCTGGAG GCCGTTGACC CGGTGCTGGA GGGCATCGTC
CGGGCCAAGC AGGACCGGAT CGACCTCAAG CTGGAGGGCT ACACCGTGCT ACCGCTGGCG
GTACACGGTG ACGCGGCCTT CGCCGGCCAG GGTGTCGTCG CCGAGACGCT GAATCTGTCC
CAGCTGCGCG GCTACCGCAC CGGCGGCACG GTGCACGTGG TGGTCAACAA CCAGGTCGGC
TTCACCACCG CACCGGAGTA CAGTCGCTCC AGTCTCTACA GCACCGACGT GGCCCGGATG
ATCCAGGCAC CGATCTTCCA CGTCAACGGC GACGACCCGG AGGCCGTGGT GCGGGTCGCC
CAGCTGGCCT TCGAGTACCG GCAGACGTTC AACAAGGACG TCGTGATCGA TCTGGTCTGC
TACCGGCGAC GTGGGCACAA CGAGGGCGAC GACCCGTCGA TGTCGAACCC TGAGATGTAC
CGGATCATCG ACTCGAAGCG GTCGGTCCGC AAGCTGTACA CGGAGGAGCT GATCGGGCGG
GGCGACATCA CCGTGGAGGA CGCGGAGGAG CTGCTGCGCG ACTACCAGGC GCAGCTGGAG
CGGGTGTTCA AGGCCACCAG GGACGCCGCC ACCACACCGC GTCAGCTCAG CCGCCCGAAG
CGGGAGGATG AGCCGGAGCC ACCGGTGGAC ACCGCGACGG ACGCGGCCGT CATCAGGGCG
ATCGGCGAGG CGCACGTCAA CCTGCCGGAA GGCTTCACCC CGCACAAGCG GATCCAGCAG
TTGCTCGACC GGCGGGCCAA GATGGCCGCC GAGGGCAACA TCGACTGGGG CTTCGGCGAG
ATCATCGCGT TCGGTGCACT GCTACACGAC GGGGTCACCA TCCGGCTCGC CGGTCAGGAC
TCGCGCCGCG GCACGTTCGT GCAGCGACAC GCGTCCGTCG TGGACGCGGA GACGGGCGAC
GATCACCTGC CGCTGGAGTC ACTCACCGCC GATGGCGAGC GGTCCCGGTT CTTCGTGCAC
GACTCGCTGC TGTCCGAGTA CGCGGCGATG GGGTTCGAAT ACGGCTACTC GGTGGAGAAC
CTCAACGCGC TGGTCTGCTG GGAGGCCCAG TTCGGTGACT TCGTCAACGG CGCCCAGACG
GTGATCGACG AGTTCATCTC CTCCGGTGAG GTCAAGTGGG GCCAGCGCTC CGCGATCACG
CTGCTGCTGC CGCACGGCCA CGAAGGCCAG GGCCCCGACC ACACCTCCGG CCGCCCAGAG
CGGTTCCTCC AGCTCTGCGC CGAGGACAAC ATGCGGGTGG TTATTCCGAC CACGCCGGCC
AACTACTTCC ACCTGCTGCG CCGCCAGGCC CTGTCACCGA AGCGCAAGCC CCTCGTGGTG
TTCACGCCCA AGTCCCTGCT GCGGCACCGA CTCTGCGTAT CGGACGTCCA GGACTTCACC
ACCGGTACCT TCCGGCCGGT GCTACCCGAC AGCGGCGCCC CGGCGCCGGA GCAGGTGAAG
CGGGTGCTGC TCTGCTCGGG CAAGGTCTAC TACGACCTGT TCCAGGCCCG GCAGGAGCGC
GGCGTCACCG ATACCGCGAT CGTCCGGGTC GAGCAGCTCT ACCCGATGCC GATCGAGGAG
ATCCGGGCCG CACTCGCGGC CTACCCGAAC GCCGTGGACT TCGCCTGGAC CCAGGAGGAG
CCAAGCAACC AGGGCGCTTG GTCGTTCGTC GCACTCAACA TGCTGGAGCA CCTGGACGGG
GTCCGGTTGC GGCGCATCTC CCGCCCTGCC GCAGCCGCCC CGGCGGTCGG CTCGGCCAAG
ATGCACGACG TCGAGCTGTC CGCCCTCATC GAGGCGGCGC TCCCCCGCCC GTAG
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| Protein sequence | MSTQQTSQEN PLAGFGPNEW IVEEMYQRYL TDPTSVDPAW HDFFADYRPA PGAGGTRGEQ
PAAPEGDGRP EPSAAQPAPA PEGKPTPTKP APAKPAAAKA APAKPAPAKP AAKESAPTPS
APRTAPLRGV AARIVQNMDA SLSVPTATSV RAVPAKLLVD NRIVINNHLA RGRGGKVSFT
HLVGYALVRA LAVHPEMNNS YSVVDGKPAL VRPEHVNLGI AIDLVKPDGS RNLVVPSIKA
CEQLDFRQFW QAYEDVVRRA RKNELTMEDH GGTTISLTNP GGIGTVHSMP RLMTGQSAII
GVGAMEYPAP YQGMSEATLA ELAVSKVITL TSTYDHRIIQ GAQSGEFLKV MHELLLGEHG
FYDQIFTSLR IPYEPVRWMR DVAIDGEGQI NKTARVHELI HAYRVRGHLM ADTDPLEFKI
RKHPDLDVLQ HGLTLWDLDR QFPVNGFAGR QRMKLRDVLG VLRDTYCRRV GIEYMHIQDP
EERRWIQQRV ERKYEKPAVD EQKHVLNRLN AAEAFETFLQ TKYVGQKRFS LEGGESLIPL
LGEVLEASAE GGLDEVVIGM AHRGRLNVLA NIVGKPYEKI FSEFEGHLDP RSTQGSGDVK
YHLGQNGKFT TPNGEHSVKV SVVANPSHLE AVDPVLEGIV RAKQDRIDLK LEGYTVLPLA
VHGDAAFAGQ GVVAETLNLS QLRGYRTGGT VHVVVNNQVG FTTAPEYSRS SLYSTDVARM
IQAPIFHVNG DDPEAVVRVA QLAFEYRQTF NKDVVIDLVC YRRRGHNEGD DPSMSNPEMY
RIIDSKRSVR KLYTEELIGR GDITVEDAEE LLRDYQAQLE RVFKATRDAA TTPRQLSRPK
REDEPEPPVD TATDAAVIRA IGEAHVNLPE GFTPHKRIQQ LLDRRAKMAA EGNIDWGFGE
IIAFGALLHD GVTIRLAGQD SRRGTFVQRH ASVVDAETGD DHLPLESLTA DGERSRFFVH
DSLLSEYAAM GFEYGYSVEN LNALVCWEAQ FGDFVNGAQT VIDEFISSGE VKWGQRSAIT
LLLPHGHEGQ GPDHTSGRPE RFLQLCAEDN MRVVIPTTPA NYFHLLRRQA LSPKRKPLVV
FTPKSLLRHR LCVSDVQDFT TGTFRPVLPD SGAPAPEQVK RVLLCSGKVY YDLFQARQER
GVTDTAIVRV EQLYPMPIEE IRAALAAYPN AVDFAWTQEE PSNQGAWSFV ALNMLEHLDG
VRLRRISRPA AAAPAVGSAK MHDVELSALI EAALPRP
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