| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4049 |
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| Symbol | |
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| ID | 5706312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4605724 |
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| End bp | 4606479 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641273475 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001538830 |
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| Protein GI | 159039577 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.203044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.111569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAGC AGCGGGTCGC GATCGTGACC GGTGCGGCGC GGGGCATCGG GGCGGCCACC
GCCCGGCGGT TGGCAGCCGA TGGGCTGGCC GTCGCCGTGG TGGACATCGA CGAGCCCGCG
ACCGGGGAGA CCGTCGCCGC CATCACCGCC GCCGGTGGGC GGGCGGTCGG CGTCGGCGCG
GACGTGTCGG ACCGGGCCCA GGTGGAGGCG GCCGTCGAGC GGGTCGCGAC CGATCTCGGG
GCGCCGACCG TGCTGGTGAA CAATGCCGGC GTGCTGCGGG ACAATCTGCT GTTCAAGATG
TCGGACGCGG ACTGGGACAC GGTGCTGGGC GTGCACCTGC GGGGCGCGTT CCTGTTCAGC
CAGGTCACAC AGCAGCATAT GGTCGAGCAG CAATGGGGCC GGATCGTCAA CCTCTCCAGC
ACCTCCGCGC TGGGCAATCG TGGCCAGGCG AACTACTCCG CCGCCAAGGC CGGCCTGCAG
GGATTCACGA AGACCCTCGC GATCGAGTTG GGTCCGTTCG GGGTGACGGT CAACGCCGTT
GCTCCGGGCT TCATCGTCAC CGACATGACC GCGGCGACCG CCGCCCGGAT GAAGGTTGAC
TTCGAGACGC TGCAGAAGCA CGCCGAGGCG GAGATTCCGG TCCGTCGGGT GGGCCGCCCC
GAGGACGTCG CGCACACCAT CTCGTTTCTG GCCAGCTCGG GTGCGTCGTT CGTCTCCGGG
CAGGTCATCT ACGTCGCCGG CGGGCCGAAG GACTGA
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| Protein sequence | MSEQRVAIVT GAARGIGAAT ARRLAADGLA VAVVDIDEPA TGETVAAITA AGGRAVGVGA
DVSDRAQVEA AVERVATDLG APTVLVNNAG VLRDNLLFKM SDADWDTVLG VHLRGAFLFS
QVTQQHMVEQ QWGRIVNLSS TSALGNRGQA NYSAAKAGLQ GFTKTLAIEL GPFGVTVNAV
APGFIVTDMT AATAARMKVD FETLQKHAEA EIPVRRVGRP EDVAHTISFL ASSGASFVSG
QVIYVAGGPK D
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