Gene Sare_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4037 
Symbol 
ID5705017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp4594600 
End bp4595268 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID641273462 
Producthypothetical protein 
Protein accessionYP_001538818 
Protein GI159039565 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0675936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00542387 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCCC CTACGACCCT TGAAGACAAG CCGGACGGGC CTGCGACCAC CGATGGTGCC 
CGTAGCCCCG CTACCCGGTT CGGCACGCTG GCGATGGCGA TCGCCATCGT GGTCGGCCTC 
CTGCTCGGCT ACGCGGGAGG TCTCCTCACC CCCGGCCTGT CCCGGCCGGG GGACGCGTCG 
GCCGAGGCAG GCTTCGCTCG GGACATGACC ACCCATCACG CCCAGGCGGT GGAGATGGGG 
TTGATCGCCT TCAAGCACGG CACGGACCAG GAGGTCCAGA CGATCGGCGG CGACATCGCC 
CTCCTCCAGC AGGGCGACAT CGGCACCATG CAGACCTGGC TTCGCTCGTG GGGGCTGGAC 
CCGACCGGAT CCGAGCCCCG CATGGCATGG CTGCCGGACG GCACCGAAAT GGTCCGCGAC 
GGGCTCATGC CCGGGATGGC CACACCGGAG CAGATGACGC AGCTGCGCGA GGCTCAGGGC 
ACGGAGCTGG ACGTACTCTT CCTGGAATTG ATGATCACGC ACCACATCGG CGGCATCCAC 
ATGGTTGACG CGCTGCTCGA CCAGAGCGAC GAGAAGGACG TGGTCCAAGC CGCGCAGACC 
ATGAAGAACA CCCAACAGAC GGACCTGACC AACCTGCGGA ACGCGCTCGA GCGCATCCAG 
CAGGGCTGA
 
Protein sequence
MTAPTTLEDK PDGPATTDGA RSPATRFGTL AMAIAIVVGL LLGYAGGLLT PGLSRPGDAS 
AEAGFARDMT THHAQAVEMG LIAFKHGTDQ EVQTIGGDIA LLQQGDIGTM QTWLRSWGLD 
PTGSEPRMAW LPDGTEMVRD GLMPGMATPE QMTQLREAQG TELDVLFLEL MITHHIGGIH 
MVDALLDQSD EKDVVQAAQT MKNTQQTDLT NLRNALERIQ QG