Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4002 |
Symbol | |
ID | 5704888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4553962 |
End bp | 4554621 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641273427 |
Product | hypothetical protein |
Protein accession | YP_001538783 |
Protein GI | 159039530 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1637] Predicted nuclease of the RecB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.308784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000199621 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGGTTGG TGATTGCGAA GTGCTCTGTG GACTACGTGG GACGGCTCTC GGCCCACCTG CCGCCGGCCA CCCGGCTGGT CATGGTGAAG GCGGACGGGT CGGTGTCGAT TCACGCGGAC GATCGGGCGT ACAAGCCGCT GAACTGGATG AGCCCGCCGT GTCGGTTGGA GGAGGCCCCG GGCGTCTGGC GGGTGGTCAA CAAGGCTGGT GAGGAACTGC GAATCACCCT GGAGGAGGTC TTCCAGGACA CCGCCTACGA CTTGGGCGTC GACCCGGGCC TGCGCAAGGA TGGCGTGGAG GCGCACCTTC AGGAACTGCT GGCAGCCAGC CCGGAGGTAC TGGGTGAGGG CCTCACGCTG ATCCGCCGGG AGTACATGAC GGCGATCGGC CCGGTGGACC TGTTGTGCCG CGACGCGGCG CACGGCACCG TCGCCGTCGA GGTGAAGCGT CGCGGTGAGA TCGACGGTGT GGAGCAGCTC ACCCGCTACC TGGAACTGCT CAATCGGGAT CCCCTGCTCG CGCCGGTGCA GGGCGTCTTC GCCGCGCAGG AGATCAAGCC GCAGGCGCGA GTACTCGCCA CGGACCGGGG GATCCGCTGC GTGGTCGTTG ACTACGACAA GCTGCGCGGC ATCGAGCGGG ACGAGCTGAC CCTGTTCTGA
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Protein sequence | MRLVIAKCSV DYVGRLSAHL PPATRLVMVK ADGSVSIHAD DRAYKPLNWM SPPCRLEEAP GVWRVVNKAG EELRITLEEV FQDTAYDLGV DPGLRKDGVE AHLQELLAAS PEVLGEGLTL IRREYMTAIG PVDLLCRDAA HGTVAVEVKR RGEIDGVEQL TRYLELLNRD PLLAPVQGVF AAQEIKPQAR VLATDRGIRC VVVDYDKLRG IERDELTLF
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