| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3994 |
|---|
| Symbol | |
|---|
| ID | 5704880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 4542407 |
|---|
| End bp | 4543762 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641273419 |
|---|
| Product | crotonyl-CoA reductase |
|---|
| Protein accession | YP_001538775 |
|---|
| Protein GI | 159039522 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01751] crotonyl-CoA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00096835 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGACA TCCTCGAAAC GATCATGGCA GCGGAGGATT CGGCGCAGCC CGAACGTGAA
CTCGCCGGTG TTGCCCGGCT CCCTGTGCCG GAGTCCTACC GAGGCGTCGT CGTACGCGCC
GAGGAGACCC AGATGTTCGA CGGGATGGCC ACGCGGGACA AGGATCCACG AAAGGCGCTG
CACGTACAGG AAGTGCCGAC CCCACAACCC GGTCCCGGCG AGGCGGTCAT CGCGGTGATG
GCGAGCGCCA TCAACTACAA CACGGTGTGG ACGAGCATCT TCGAACCGTT GCCGACCTTC
AAGTTCCTCC AACGCTACGG TCGACTCTCC GAGCTGACCA AGCGGCACGA CCTGCCGTAC
CACGTGGTCG GCTCGGACGC GGCCGGTGTC GTGCTGCGTA CCGGCCCCGG CGTGACCCGG
TGGCAGGCCG GCGACGAGGT CGTCGCGCAC TGCCTCTCGG TGGAACTCGA GGAGGCGGCG
GGGCACGACG ACACCATGCT TGACCCACAG CAGCGGATCT GGGGCTTCGA GACCAACTTT
GGCGGTCTGG CCGAGCTGGC GGTGGTCAAG GCCAACCAGC TCATGCCGAA ACCGCGCCAC
CTCAGCTGGG AGGAGGCGGC CAGCCCAGGG CTGGTCAACT CCACCGCCTA CCGCCAACTC
GTCTCGCACC ACGGCGCCAA CATGAAGCAG GGTGACGTCG TACTGATCTG GGGAGCCTCC
GGTGGCCTCG GCAGCTACGC CACCCAGATG GCGCTCACCG GTGGGGCGAT TCCGGTCTGC
GTGGTCTCCT CTCCGGACAA GGCGGAGCTG TGCCGGCGAA TGGGCGCGGA TCTGGTCATC
GACCGAGCCG CCGAAGGCTT CCGGTTCTGG AAGGACGAAC AGACCCAGGA CTCGGACGAG
TGGCGCCGCT TCGGCGAACG AATTCGGGAA CTGACCGGCG GCGAGGACCC CGACATCGTC
TTCGAACACC CGGGCCGGGA GACCTTCGGC GCCAGCGTCT TCGTCACCAA ACGCGGTGGC
ACCGTCGTCA CCTGCGCCTC GACCAGTGGC TACCAACACC AGTACGACAA CCGCTACCTC
TGGATGCATC TGAAGCGGAT CGTCGGCAGT CACTTCGCGA ACTACCGGGA GGCATGGGAG
GCGAATCGTC TGATCGCCCT CGGCAAGATC CACCCCACCG TGTCGAAGAC CTACGGCCTG
GAACAGACCG GCCAAGCCGC CTACGAGGTG CACCGGAATG CGCACCAGGG CAAAGTCGGC
GTCCGCTGCC TCGCCCCGAC CGACGGCCTC GGCATCCGCA ACCCCGATCT CCGCGCGCGG
CACGAGGTGG CGATCAACCG GTTCCGCGGT CACTGA
|
|---|
| Protein sequence | MQDILETIMA AEDSAQPERE LAGVARLPVP ESYRGVVVRA EETQMFDGMA TRDKDPRKAL
HVQEVPTPQP GPGEAVIAVM ASAINYNTVW TSIFEPLPTF KFLQRYGRLS ELTKRHDLPY
HVVGSDAAGV VLRTGPGVTR WQAGDEVVAH CLSVELEEAA GHDDTMLDPQ QRIWGFETNF
GGLAELAVVK ANQLMPKPRH LSWEEAASPG LVNSTAYRQL VSHHGANMKQ GDVVLIWGAS
GGLGSYATQM ALTGGAIPVC VVSSPDKAEL CRRMGADLVI DRAAEGFRFW KDEQTQDSDE
WRRFGERIRE LTGGEDPDIV FEHPGRETFG ASVFVTKRGG TVVTCASTSG YQHQYDNRYL
WMHLKRIVGS HFANYREAWE ANRLIALGKI HPTVSKTYGL EQTGQAAYEV HRNAHQGKVG
VRCLAPTDGL GIRNPDLRAR HEVAINRFRG H
|
|---|
| |