Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3928 |
Symbol | |
ID | 5703664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4472019 |
End bp | 4473746 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641273353 |
Product | cobyric acid synthase CobQ |
Protein accession | YP_001538710 |
Protein GI | 159039457 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.111937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0307354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCG GGCTGCTGGT CGCCGGCACC ACCTCGGACG CCGGCAAGAG CGTACTCACC GCCGGGATCT GTCGATGGCT GCACCGGCGG GGCGTGCGGG TGGCGCCGTT CAAGGCGCAG AACATGTCCA ACAACTCGGC CGTGGTGGTC GGCCCGGACG GACGCGGCGG AGAGATCGGA CGGGCCCAGG CGATGCAGGC GGCGGCCTGT GGGCTGGCAC CGGATCTGCG GTTCAATCCC GTGCTGCTCA AGCCCGGCAG CGACCGGACC AGCCAGGTGG TGCTGCTCGG TGAGGCGGTC GACACACTCA CCACCGGTAC GTTCCGTCAG CTTCGACCCC GTCTCGCCGA TACCGCGTAC GCGGCGCTGG CTGACCTGCG GGCGACCCAC GACGTGGTGA TCTGCGAGGG GGCAGGCAGC CCAGCGGAGA TCAACTTACG GGCCGGGGAC TACGTCAACA TGGGGCTGGC CCGGCACGCA GGCCTGCCCG CGATCGTGGT CGGCGACATC GACCGCGGGG GTGTCTTCGC CTCGATGTTT GGCACCGTAG CCCTGCTGGA GCCGGCCGAC CAGGCGCTGG TCGCCGGATT CGTCATCAAC AAGTTCCGCG GTGACCCGAG CCTGTTGGCC CCGGGCCTGG ACATGCTGCG TCAGGTCACC GGGCGGCCCA CGTACGGCGT GCTGCCCTGG GCGCTCGACC TCTGGCTGGA CGCGGAGGAC TCGCTTGCGT ACGGGCGGGT ACTCGGCCGC CCGGCCGCCC CCCGTGGCAG TGACTGGCTG GATGTGGCCG TGGTACGGCT GCCTCGGATC AGTAACGCCA CCGATGTCGA GGCACTCGCC ACCGAGCCGG GCGTGCGGGT GCGCCTCACC GTCGAGCCAG CCGAGCTCGC CGCCGCCGAC CTGGTCGTGC TGCCCGGGTC CAAGTCGACC GTGGCGGACC TGGACTGGCT TCGGCAGTCC GGCCTCGCCG ATGCCGTGCT CGCCCACGCC GCCGCCGGGC GGCCTCTGCT CGGTGTCTGC GGCGGGTTCC AGATGCTCGG GCGTCTCATC CACGATCCGG TGGAGAGTCG GCGGGGCAGC GTACCCGGCC TGGGGCTGCT GCCGGTCGAG GTCACCTTCG ACCCGTGCAA GACGGTTCGC CGATCTGCCG GCATCGGCTG GGATGCCGAG CCGGTCGGCG GCTACGAGAT CCACCATGGG TACGTCTCGG CCGCCGCCCC CGACCTCGCG CCGCTGTTCG CCTACCACGA CGGCACCGGT GAGGGCGCGG TCGCCGGATC GGTGTACGGC ACCCACTGGC ACGGGGCGTT CGAGTCCGAC GGGTTCCGCC GCCGGTTCCT GGCCCGGGTG GCACGTCAAG CCGGACGGCA CGGTTTCCAG GTCGCCCCGG ACACCTCCTT CGCCGGTGCT CGCGAACGCT CCCTGGACCT GCTCGGCGAT CTGGTCGAGG AGCACCTGGA CACGGCCGGG CTGTGGCGGC TGATCGAGTC CGGCCCGTCA CCGGGCCTGC CGTTCATCCC GCCGGGCGCG CCAGACGCGG GGCCCCGGAC CGGGAGCGGC GCGCCAGACA CGGAGCCCGC GGACCGGGAG CCGGGGACAG CCGCGGGCAG GGGCCCGGGT TCAGTGGCGA ACGTCGGCGG GGCGGTCGGT GACCGGGAGT CCGGCATCCC GCCAGGCGTC CACTCCTCCG ATGACATCGG TGGCTCGGTG CAGGCCGAGC GCGCGTAG
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Protein sequence | MSGGLLVAGT TSDAGKSVLT AGICRWLHRR GVRVAPFKAQ NMSNNSAVVV GPDGRGGEIG RAQAMQAAAC GLAPDLRFNP VLLKPGSDRT SQVVLLGEAV DTLTTGTFRQ LRPRLADTAY AALADLRATH DVVICEGAGS PAEINLRAGD YVNMGLARHA GLPAIVVGDI DRGGVFASMF GTVALLEPAD QALVAGFVIN KFRGDPSLLA PGLDMLRQVT GRPTYGVLPW ALDLWLDAED SLAYGRVLGR PAAPRGSDWL DVAVVRLPRI SNATDVEALA TEPGVRVRLT VEPAELAAAD LVVLPGSKST VADLDWLRQS GLADAVLAHA AAGRPLLGVC GGFQMLGRLI HDPVESRRGS VPGLGLLPVE VTFDPCKTVR RSAGIGWDAE PVGGYEIHHG YVSAAAPDLA PLFAYHDGTG EGAVAGSVYG THWHGAFESD GFRRRFLARV ARQAGRHGFQ VAPDTSFAGA RERSLDLLGD LVEEHLDTAG LWRLIESGPS PGLPFIPPGA PDAGPRTGSG APDTEPADRE PGTAAGRGPG SVANVGGAVG DRESGIPPGV HSSDDIGGSV QAERA
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