| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3919 |
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| Symbol | |
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| ID | 5703770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4459686 |
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| End bp | 4462289 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641273344 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001538701 |
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| Protein GI | 159039448 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase
[COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.936294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.284272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCA GTACCGAACT CGTCAACCCG GTCGGTGGCG GCCTGGACCA GGAGCTACGC
ACCGCGATCG GTCGGGTCGC CCGCGTCCCG CAACTGCTGA TCGCCTGCGA CTACGACGGC
ACCCTCGCCC CGATCGTCGA GGATCCGAGC ACGGCCGTAC CGTTGCCCGA GGCGGCGGCT
GCGGTACGCG CGCTCGCCTC GCTACCGCAG ACCACCGTGG CGGTTGTCTC CGGACGGGCG
CTGCGTGACC TGGCTGCGCT GTCCCGGCTG CCCAGCGAGG TCCATCTGGT CGGCAGCCAC
GGCTCCGAGT TCGACATCGG CTTCGTCGAG CGGCTCTCCC CCGAGCTGGT CGCCGTCCGC
ACCCGGCTAC GCGACGCGCT GCGCGAGATC GTCGCCGCCC ACCCCGGGAT CCGGCTGGAA
CGCAAGCCGG CCAGTGTCGC CGTACACACC CGCGGCGTTG ACCCGCAGGT CGCCGCCGCA
GCCGTCGAGG CGGTTCGCAA CGGCCCCGCG ACCTGGGACG ACGTCACCGT CACCCAGGGC
AAGGAAGTCA TCGAGTTGTC GGTGGTCGCC ACCCACAAGG GCACCGCCGT CGACCAGCTA
CGTACCCAGC GCTCCGCCAG CGCGGTACTG TTCATCGGCG ACGACGTCAC CGACGAGAAC
GCGTTCGGCA ACCTGCACGG GCCGGACGTC GGAATCAAGA TCGGGCCGGG CGAGACCAAG
GCACAGTACC GGGTCACCGA GCCGATCGAG GCGGCCCGCG CCCTCGGCCT GCTGCTGGAG
ACCCGACGGC ACTGGCTGTT CGGCGAGCGG GCGGTGCCGA TCGAACGGCA CTCGATGCTG
GCCAACGGCC GGACGGTGGC GCTGCTCACT CCCGAGGCCA AGGTCACCTG GCTGTGCAAC
CCGAAGCCCG ACTCCGCGGC GATCTTCGCC GACCTGGTCG GCGGCAGCCC CGCCGGCTAC
TTCAGCGTCG TGCCGGAGCG CGGCGGCATC CCGCTCGGCC AGCGCTACCG CTCGAACACC
ATGACCGTGG AGACCCGGTG GTCCGGCCTG ACCGTGACCG ACTGGCTCGA CACGCCGGAC
ACCGAGACCA CACCCGACGG CCCGGCGATC GTCAGCGCCG ACTCGATCCT GGTCCGGGTG
CTCACCGGAC GCGGCCGAGC CCACCTCGAG TTCGCCCCCC GGCCCGAGTT CGGCCAGGTC
GCCGTTCAGC TGCAACCGCT CGATGACGGG CTGCTGGTAC TCGGTTCCAA CGAGCCGGTC
GCGCTGTACT CGCCCGGTGT GACGTGGGAA GTGACCAGCG ATGGCGTGTA CGAGACGGCG
AAGGCCGTCG TCGACCTGTC CACCGCCGGC GGACCGGTCG TGCTGGAGAT GCGTTTCGGC
ACGCACAGTC TGGAACACCA CCGACTGCCG ATCCACGAAC GGCAGGCTGC GGCGGAACAG
CCCTGGAAGG ACTGGGTGTC CACGCTGCGG CTCCCGAACA CCGGCCGGGA CTTGGTCGCC
CGCAGCGCGC TCACCCTACG CGGGCTGTGC CACCAGCCGA GCGGTTCGAT CCTGGCCGCC
GCGACCACCT CACTGCCCGA GGAACTGGGC GGCGTGCGCA ACTGGGACTA CCGCTACTGC
TGGCTGCGCG ACGCGGCGCT GACCGCCCGC GCTCTGGTCG ATCTCGGCTC CACCGGTGAG
GCCGAGGCGC TGCTGCGTTG GATCGACGGT GTCGTCGAGC GCACCGGTGG GCACCCCGAA
CGGCTGCATC CGCTCTACAC GGTCGACGGT TACGAACTGG GCGCCGAGGC CGTTATCGAC
ACACTTCCCG GCTACGCCGG TTCCCGGCCC GTCCGGGTCG GGAACCTCGC CAACCACCAG
CTCCAACTCG ATGTCTTCGG TCCGATCGCC GACCTGATCG CGGCCGTGGC CGACGCTCGC
GGCTCCGTGC GCGACGACGA GTGGCGGGTG CTGGAGAACA TGGTGGAAGC GGTCCGCCGC
CGCTGGCACG AGCCGGACCA TGGCATCTGG GAGGCGCGCC TGGCGCCCCG ACATCACATC
TTCTCGAAGG TGATGTGCTG GCTGACCGTG GACCGGGCGC TGCACGTCGT ACGTCAGCAC
GGCGGCGAGG ATCAGCCCGA GTGGGTGGAA CTACGCGACC GAATCGGGGC CAACGTGCTC
GAGTTCGGCT GGCACGAGCA GGCCGAGGCG TACAGCGTCG CGTATGGGCA CGAGGACAGT
GACGCCTCCT CGCTCTGGAT CGGACTGTCC GGCCTGCTGC CCGGGGACGA CCCACGCTTC
GTGTCCACCG TGCTCAAGAT CGAGGCGGAC CTGCGCAGTG GCCCGGTCGT CTACCGCTAC
CACTGGGAGG ACGGCCTGCC CGGCCGGGAG GGCGGCTTCC ACATCTGCAC CTCGTGGCTG
ATCGAGGCGT ACCTGCGTAC CGGCCGTCGA GGGGACGCGG AGGAACTGTT CGCCCAGATG
ATCGACACCG CCGGCCCGAC TGGGCTGCTG CCCGAGCAGT ATGACCCGCT GGCCGAGCGC
GGGCTGGGCA ATCATCCACA GGCCTACAGT CACCTCGGCG TGATCCGCTG CGCCCTCCTG
TTGGACAACA TGCTCAAGCA GTGA
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| Protein sequence | MSTSTELVNP VGGGLDQELR TAIGRVARVP QLLIACDYDG TLAPIVEDPS TAVPLPEAAA
AVRALASLPQ TTVAVVSGRA LRDLAALSRL PSEVHLVGSH GSEFDIGFVE RLSPELVAVR
TRLRDALREI VAAHPGIRLE RKPASVAVHT RGVDPQVAAA AVEAVRNGPA TWDDVTVTQG
KEVIELSVVA THKGTAVDQL RTQRSASAVL FIGDDVTDEN AFGNLHGPDV GIKIGPGETK
AQYRVTEPIE AARALGLLLE TRRHWLFGER AVPIERHSML ANGRTVALLT PEAKVTWLCN
PKPDSAAIFA DLVGGSPAGY FSVVPERGGI PLGQRYRSNT MTVETRWSGL TVTDWLDTPD
TETTPDGPAI VSADSILVRV LTGRGRAHLE FAPRPEFGQV AVQLQPLDDG LLVLGSNEPV
ALYSPGVTWE VTSDGVYETA KAVVDLSTAG GPVVLEMRFG THSLEHHRLP IHERQAAAEQ
PWKDWVSTLR LPNTGRDLVA RSALTLRGLC HQPSGSILAA ATTSLPEELG GVRNWDYRYC
WLRDAALTAR ALVDLGSTGE AEALLRWIDG VVERTGGHPE RLHPLYTVDG YELGAEAVID
TLPGYAGSRP VRVGNLANHQ LQLDVFGPIA DLIAAVADAR GSVRDDEWRV LENMVEAVRR
RWHEPDHGIW EARLAPRHHI FSKVMCWLTV DRALHVVRQH GGEDQPEWVE LRDRIGANVL
EFGWHEQAEA YSVAYGHEDS DASSLWIGLS GLLPGDDPRF VSTVLKIEAD LRSGPVVYRY
HWEDGLPGRE GGFHICTSWL IEAYLRTGRR GDAEELFAQM IDTAGPTGLL PEQYDPLAER
GLGNHPQAYS HLGVIRCALL LDNMLKQ
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