Gene Sare_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3910 
Symbol 
ID5704983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4450368 
End bp4450901 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content73% 
IMG OID641273335 
ProductHNH endonuclease 
Protein accessionYP_001538692 
Protein GI159039439 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.937815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGACA TACGACCCAC GGTGGGCTCT GGTGCGCTCG TCCTCAACGC CACCTACGAG 
CCCCTGTGTG TCGTGTCGGT CCGGCGCGCG GCCATTCTTG TGCTCACCGC CAAAGCCGTC
TGTGTCGCCG ACGGGGACGA GGTCCTGCGC AGCGCCCGGA ACTCGCTGCC GGTGCCCTCG
GTCGTGCGGC TCACCCGCTT CGTCCGGGTG CCCTTCCGCG CTCACGTCGG GCTGTCCCGG
CGAGCGATCT TCGCACGGGA CGGGTGGCGG TGCGCCTACT GCCGGGGCCC GGCGGAGACC
ATCGACCACG TCCTTCCGCG TAGCCGGGGC GGCCGGCACT CCTGGGAGAA CGTGGTGGCG
GCGTGTGCCC GGTGCAACCA CACGAAGGGC GACAAGACAC CGGCCGAGCT GGGCTGGCGG
CTCCCTGCCC CGCCGGTGGC ACCGAAAGGC ATCGCGTGGC GGGTGCTCGG CCACCGGCCT
CCCGACCCGC GTTGGGTCGA CTGGCTCGAC CTGCGCGAGC CCGAGGCCGC CTGA
 
Protein sequence
MPDIRPTVGS GALVLNATYE PLCVVSVRRA AILVLTAKAV CVADGDEVLR SARNSLPVPS 
VVRLTRFVRV PFRAHVGLSR RAIFARDGWR CAYCRGPAET IDHVLPRSRG GRHSWENVVA
ACARCNHTKG DKTPAELGWR LPAPPVAPKG IAWRVLGHRP PDPRWVDWLD LREPEAA