Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3889 |
Symbol | |
ID | 5706386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4430061 |
End bp | 4430528 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641273314 |
Product | ribose-5-phosphate isomerase B |
Protein accession | YP_001538671 |
Protein GI | 159039418 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR02133] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.212373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGTCT ACCTGGGATC CGACCACGCC GGCTTCGAGC TGAAGGCGCA CCTGGCCAAC CACCTGGCCA AGGAGGGGTA CGACGTGGTC GACGTCGGCC CACAGGCCTA CGACCCGGAC GACGACTACC CGGCGTTCTG CCTGCACACC GGGGACCGGG TGGTGGCCGA CGGGGGTAGC CTCGGGGTGG TCATCGGCGG CTCGGGCAAC GGCGAGCAGA TTGCCGCGAA CAAGATCGAC GGTATTCGGG CCGCCCTTGC CTGGAATATC GATACGGCAC ACCTGGCCCG AGAGCACAAC AACGCCAACG TCGTCGCGAT CGGCGCTCGG CAGCACACCC TCGATGAGGC CACCGCCATC GTCGAGGCGT TCCTGACCAC CCCGTTCTCC GGTAAACAGC GTCACTCCCG CCGCATCGAC CAGGTGGCCG ACTACGAGCG CACCCGGGAG CTCCCGGACC TGCCCTGA
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Protein sequence | MRVYLGSDHA GFELKAHLAN HLAKEGYDVV DVGPQAYDPD DDYPAFCLHT GDRVVADGGS LGVVIGGSGN GEQIAANKID GIRAALAWNI DTAHLAREHN NANVVAIGAR QHTLDEATAI VEAFLTTPFS GKQRHSRRID QVADYERTRE LPDLP
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