Gene Sare_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3889 
Symbol 
ID5706386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4430061 
End bp4430528 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content68% 
IMG OID641273314 
Productribose-5-phosphate isomerase B 
Protein accessionYP_001538671 
Protein GI159039418 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.212373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTCT ACCTGGGATC CGACCACGCC GGCTTCGAGC TGAAGGCGCA CCTGGCCAAC 
CACCTGGCCA AGGAGGGGTA CGACGTGGTC GACGTCGGCC CACAGGCCTA CGACCCGGAC
GACGACTACC CGGCGTTCTG CCTGCACACC GGGGACCGGG TGGTGGCCGA CGGGGGTAGC
CTCGGGGTGG TCATCGGCGG CTCGGGCAAC GGCGAGCAGA TTGCCGCGAA CAAGATCGAC
GGTATTCGGG CCGCCCTTGC CTGGAATATC GATACGGCAC ACCTGGCCCG AGAGCACAAC
AACGCCAACG TCGTCGCGAT CGGCGCTCGG CAGCACACCC TCGATGAGGC CACCGCCATC
GTCGAGGCGT TCCTGACCAC CCCGTTCTCC GGTAAACAGC GTCACTCCCG CCGCATCGAC
CAGGTGGCCG ACTACGAGCG CACCCGGGAG CTCCCGGACC TGCCCTGA
 
Protein sequence
MRVYLGSDHA GFELKAHLAN HLAKEGYDVV DVGPQAYDPD DDYPAFCLHT GDRVVADGGS 
LGVVIGGSGN GEQIAANKID GIRAALAWNI DTAHLAREHN NANVVAIGAR QHTLDEATAI
VEAFLTTPFS GKQRHSRRID QVADYERTRE LPDLP