| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3861 |
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| Symbol | |
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| ID | 5705892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4390429 |
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| End bp | 4393605 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641273282 |
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| Product | ribonuclease |
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| Protein accession | YP_001538644 |
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| Protein GI | 159039391 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00688294 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGCGA ACGAGCCCGA GGGCGGCGAA CGCACCGGCT TCCACCCGGA TGGCGAGACC
GCCGAATACC ACGCTGGCGA CGGTGGCGCG CCCGCGAAGA CCACGTCGGC GGAGGGTGGT
GAAGCGGCGA CCGGGGAACT GGCCGGGAGT AGCCCCGAGC CGGTCGGCCC GGCGACAAGT
GAGGCGGCTG GCGCCGGCGT GGCTGAGCTG GGCGAGCCGG CGGCCCGGGT CCGCAAACGG
GCCACTCGGA AGCGGGCGAC CCCGGTCAAC CGGCCGGAAC AGACCGAGGC GCCGATCGAG
GCGGGCACCG CCGCGGCGTC GGGGGCGGGC GAGGCGCCCC AGGCCGAGGT GCTCGCCCCG
ATCGCGGGCG ACGGCGAGCC GGCGACGAAG TCGACGCGTC GTCGCCGGAA GGCCACGACG
GCCAAGGCGG CCGAGGAATC GGTGACCGTC TCCGGCGCGG AGGAGACGGC GGCGGACATT
GTGCCGCCGG TGAAGGTGAC ACGGACCCGC CGCAAGAAGA CAGCCCCCGC GCCGACCGAA
CCAGCCGCCA CGACGGCCGA GCCCGATGCT GTACCGGCCG GGCCCGCTCC GACCGCGGCT
GAACGGGAGT CGGTAGCGGC CGGGCCGGCC GCCACCGCGG CTGGGCCGGT CGCGGGGCCT
GCGGAGAGGA AGGCCGAGTC AGCTCCGCCC GCCAGTGCCG CAGCGGGGGA GGTGCCGCCC
GGTGCGGCGG TGGCCGGCCC GGAGCAACAG CCACTTCGTC CCCGGGTTCG GAGTTCGGCC
GAACCGGAGC GTCCGGCCCG CCGCCGCGCC GTGCTCTCCG CTCCGACAGT GCTGTTCATG
CCCCCGCAGC CCGAGGAACC GGCGCCGGCG CGGCCCGCCG AGGAACGGGT CGAGACGTCG
CGTCGCCGGC GTCGGGGCCG CCGGGACGTC GAGCCGACCA CGGAGGTCGA GACCGGTGAG
CCCCGGGAGG CCGACGAGGA AGCCCGGGAA GTCCGAAAGC CCAGGGAGAC CGCGGAGCCC
CGGAAGACTG AAGAGGCCGA GGAGCCCCGG GAGACCGAAG AGGCCGAGGA GCCGGGGGAG
ACCCCCGAGG CCTCCGAGGA CGAGGACGAG ACCGCCGGTG GCCGCCGTCG GCGGCGGCGA
GGCCGTCGCG GCCGCGGCCG CGGCAAGGGG AGCGCCGAGG ACGTCGATGA CCAGGAAGCC
GAGGAGGTCG CTGCCCAGGC CGAGACGGCC GAGGCCGAGG ATGATGAGGA GGAGGCCGAG
GCCGGAGGAG GCGATGGGCT GACCCGCCGC CGTCGGCGGC GGCGGCGACG GGGCGCCGGT
GATGTGGAAA CCGCCGCGGA GGACGGCGTG CCCACGGTCG TGAAGATCCG GGAGCCGCGC
CGCACCGTCG ACGAGGTGCA GGGTGTCACT GGCTCAACCC GACTGGAGGC CAAACGCCAG
CGCCGGCGCG ACGGCCGGGA ACAGCGCCGC ACCCGGCCGC CGATCCTCAG CGAGGCGGAG
TTCCTGGCCC GCCGGGAGGC GGTGGATCGG GTGATGGCCG TGCGGCAGCG CGGCGACCGG
ACGCAGATCG CCGTGCTGGA GGACGGCGTG CTGGTCGAGC ACTACGTCAC CCGTAACTCG
TCCACCACCA TGGCCGGCAA CGTCTACCTG GGCAAGGTGC AGAACGTCCT GCCCAGCATG
GAGGCCGCGT TCGTCGATAT CGGGCGGGGC CGCAACGCGG TGCTGTACGC GGGTGAGGTC
AACTGGGACG CCACCGGGCT GGAGGGGAGG GCCCGTTCGA TCGAACAGGC CCTCAAGTCC
GGTGACTCGG TCCTGGTGCA GGTCACCAAG GATCCGATCG GGCACAAGGG CGCCCGGTTG
ACCAGCCACG TGGCGCTTTC CGGCCGGCAC CTCGTCTACG TGCCCGGTGG CAATACCTCC
GGGATCAGCC GCAAGCTGCC GGACAACGAG CGCAGGCGGC TGCGGGACGC GCTGAAGAAG
CTGGTCCCGG AGGGGGCGGG CGTGATCGTC CGGACGGCCG CCGAGGGCGC CAGCGAGGAC
GAGCTGGCAC GGGACGTCAA GCGGTTGCAG GCGCAGTGGG AGGACATCCA GGCGAAGGCC
GGTAAGGGCG GTGCGCCGGT GCTGCTCTAC GAGGAGCCCG ACCTTGTCAT CCGGGTTGTC
CGGGACCTCT TCAACGAGGA CTTCCGGGAG CTGGTGATCG AGGGCGAGGG CGCGTACGAC
ATGGTCGAGT CGTACCTGTC GCACGTGTCG CCGGACCTGG TCGCCCGGCT GCGCCGACAC
GTGGGTACCG TCGACGTGTT CACCGAATAC CGGATCGACG AGCAGATCCT GAAGGGTCTG
GACCGCAAGG TGTTCCTCCC CTCCGGGGGA CACCTGGTGA TCGACCGTAC CGAGGCGATG
ACCGTGGTCG ACGTGAACAC CGGTAAGTAC ACGGGTGCCG GCGGGAACCT CGAGGAGACG
GTCACCCGGA ACAACCTGGA GGCCGCCGAG GAGATCGTCC GTCAGCTGCG GCTACGCGAC
ATCGGTGGCA TCGTGGTGAT CGACTTCATC GACATGGTGC TGGAATCGAA CCGGGAGTTG
GTGCTACGCC GGCTGACCGA GTGCCTGGGG CGGGACCGCA CCAAACACCA GGTGACTGAG
ATCACCTCGC TCGGTCTGGT GCAGATGACC CGTAAGCGGA TCGGGGCCGG CCTGCTGGAG
GCGTTCAGCG AGACCTGCGA CTGCTGCAAG GGCCGTGGGC TGATCGTCCA TACCGAGCCG
GTGCCGGAGA AGCCCCGCAC GGGTGGCACC GGGGAGAGGG TCAAGGCGGT CGCGTCGGCG
GAGACGGGCA CTGCGCCCCG CCGCCGGACA CGCAAGGGAT CCGTCACTGC CGAGCGGACC
TCCGTCGAGG TCGTCGAGGG CGAGCGGGAC GCCGGAACCA CCGATACCCC GGGGGCCGCG
CCCACCACGC CAGGTGCCGA CTACTACGAC ACGATGGGTT ACGACCTGTC CCGGTACGAG
ACCGAGACGC CAGCGGCCCC GAGCGTGGCG GCGAGTCAGC CCGGCGACGA CCCTGCACGG
CTCGCGGCGC CCGACGACCC GGACGCGGTG GGCGGCGACG ACGGTGAGGA GCCCGAGACC
GCGGCGGGTC GCCGGCGGTC CCGCCGGGGT GGTTCGCGGC GCCGTACCCG CCCCTGA
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| Protein sequence | MLANEPEGGE RTGFHPDGET AEYHAGDGGA PAKTTSAEGG EAATGELAGS SPEPVGPATS
EAAGAGVAEL GEPAARVRKR ATRKRATPVN RPEQTEAPIE AGTAAASGAG EAPQAEVLAP
IAGDGEPATK STRRRRKATT AKAAEESVTV SGAEETAADI VPPVKVTRTR RKKTAPAPTE
PAATTAEPDA VPAGPAPTAA ERESVAAGPA ATAAGPVAGP AERKAESAPP ASAAAGEVPP
GAAVAGPEQQ PLRPRVRSSA EPERPARRRA VLSAPTVLFM PPQPEEPAPA RPAEERVETS
RRRRRGRRDV EPTTEVETGE PREADEEARE VRKPRETAEP RKTEEAEEPR ETEEAEEPGE
TPEASEDEDE TAGGRRRRRR GRRGRGRGKG SAEDVDDQEA EEVAAQAETA EAEDDEEEAE
AGGGDGLTRR RRRRRRRGAG DVETAAEDGV PTVVKIREPR RTVDEVQGVT GSTRLEAKRQ
RRRDGREQRR TRPPILSEAE FLARREAVDR VMAVRQRGDR TQIAVLEDGV LVEHYVTRNS
STTMAGNVYL GKVQNVLPSM EAAFVDIGRG RNAVLYAGEV NWDATGLEGR ARSIEQALKS
GDSVLVQVTK DPIGHKGARL TSHVALSGRH LVYVPGGNTS GISRKLPDNE RRRLRDALKK
LVPEGAGVIV RTAAEGASED ELARDVKRLQ AQWEDIQAKA GKGGAPVLLY EEPDLVIRVV
RDLFNEDFRE LVIEGEGAYD MVESYLSHVS PDLVARLRRH VGTVDVFTEY RIDEQILKGL
DRKVFLPSGG HLVIDRTEAM TVVDVNTGKY TGAGGNLEET VTRNNLEAAE EIVRQLRLRD
IGGIVVIDFI DMVLESNREL VLRRLTECLG RDRTKHQVTE ITSLGLVQMT RKRIGAGLLE
AFSETCDCCK GRGLIVHTEP VPEKPRTGGT GERVKAVASA ETGTAPRRRT RKGSVTAERT
SVEVVEGERD AGTTDTPGAA PTTPGADYYD TMGYDLSRYE TETPAAPSVA ASQPGDDPAR
LAAPDDPDAV GGDDGEEPET AAGRRRSRRG GSRRRTRP
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