| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3836 |
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| Symbol | hrcA |
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| ID | 5704860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4367539 |
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| End bp | 4368561 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641273258 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_001538620 |
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| Protein GI | 159039367 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0984898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000187974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATCTCG ACGACCGCAA ACTCGCGGTG TTGCGCGCGA TCGTCGAGGA CTACGTCGCC
ACGCAGGAAC CCGTCGGCAG TAAGGTGCTG GTCGAGCGTC ACCAACTCGG GGTCTCCCCC
GCGACAGTCC GCAACGACAT GGCGGTGCTG GAGGAGGAGG GCTACATCCG GCAGCCGCAC
ACCAGCGCCG GCCGGGTGCC CACCGACCGT GGCTATCGGC TCTTCGTGGA CCGGCTGTCC
CGGGTGAAGC CGCTCACTCC CGCCGAGCGC CGGGCGATCG AGCGCTTCCT GGTGGGCGCG
GTCGACCTCG ACGACGTGGT GCACCGCACG GTGCGACTGC TGGCTCAGCT GACCCGGCAG
GTCGCCGTCG TGCAGTACCC ATCGTTGGCC CGATCCTCGG TTCGCCACCT GGAACTGGTG
CCGATCTCCA CCACTCGGCT GATGCTTGTC ATGATCGTCG ACACCGGCCG GGTCGAGCAG
CGCCTCGTCG AACTACCGGG GCCGATACCC CCGGACGACG TGATCGACCT GCGTCAGCTG
GTCAACGAGA AGCTGGTCGG CACCCGGCTC GCCGATACGC CACCGCTCGT GCAGGCGTTG
GTCGATGAGG TGACCGCAGA GCTGCGGCCG GCCATGGCGA CCCTTTCCAC CGTTCTGTTG
GAGACCCTCG TCGAGCGGCA CGAGGAGCGC ATCGCCCTCG CCGGCACCGC CAACCTCACC
CGTGGTGGCC TGCTTGACTT CCAGGGCTCG TTGCGCCCCA TCCTGGAGGC GTTGGAGGAA
GAGGTGGTGC TCCTCAAACT CATCGGGGAG GTCGAGCCGA GCGCGATGCG CGTCCGGATC
GGTGACGAGA ACGAGATCGA CAATCTTCGC GCCACCTCCG TGGTGAGCAC AGGCTACGGC
CCGGGGGTGA CCATCCTGGG GGGCCTGGGA GTGGTCGGGC CAACCCGGAT GGACTACCCC
AGCACGATTG CCACGGTGCG CGCCGTGGCA CGCTACGTGG GCGACCTGCT GGCCCAGAAC
TAG
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| Protein sequence | MDLDDRKLAV LRAIVEDYVA TQEPVGSKVL VERHQLGVSP ATVRNDMAVL EEEGYIRQPH
TSAGRVPTDR GYRLFVDRLS RVKPLTPAER RAIERFLVGA VDLDDVVHRT VRLLAQLTRQ
VAVVQYPSLA RSSVRHLELV PISTTRLMLV MIVDTGRVEQ RLVELPGPIP PDDVIDLRQL
VNEKLVGTRL ADTPPLVQAL VDEVTAELRP AMATLSTVLL ETLVERHEER IALAGTANLT
RGGLLDFQGS LRPILEALEE EVVLLKLIGE VEPSAMRVRI GDENEIDNLR ATSVVSTGYG
PGVTILGGLG VVGPTRMDYP STIATVRAVA RYVGDLLAQN
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